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Gene Expression Data
Assay Details
Assay
Reference: J:101679 Deltagen Inc, NIH initiative supporting placement of Deltagen, Inc. mice into public repositories. MGI Direct Data Submission. 2005;
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:3639215
Gene symbol: Scn9a
Gene name: sodium channel, voltage-gated, type IX, alpha
Reporter: lacZ
Direct Detection
Results
Specimen Mouse 214956 - Image 95549280: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: prostate gland Very strong Regionally restricted 95549280 Expression is frequently seen in the ganglia.

Specimen Mouse 214956 - Image 96544845: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: hypothalamus Trace 96544845 There is scattered expression in the hypothalamus.

Specimen Mouse 214956 - Image 96548023: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: brainstem Weak 96548023 There is occasional staining in the brainstem.

Specimen Mouse 214956 - Image 96550319: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: brainstem Weak 96550319 There is occasional staining in the brainstem.

Specimen Mouse 214956 - Image 96555449: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: trachea epithelium Weak 96555449 There is occasional staining in the epithelial cells of the mucosal epithelium.

Specimen Mouse 214956 - Image 96555747: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: larynx epithelium Weak 96555747 There is occasional staining in the epithelium.

Specimen Mouse 214956 - Image 96556572: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: pharynx Strong Regionally restricted 96556572 There is scattered expression in the ganglia.

Specimen Mouse 214956 - Image 96556938: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: pharynx epithelium Weak 96556938 There is scattered expression in the epithelial cells.

Specimen Mouse 214956 - Image 96559436: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: tongue Strong 96559436 There is scattered expression in the tongue.

Specimen Mouse 214956: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: aorta Absent
TS28: heart Absent
TS28: esophagus Absent
TS28: gallbladder Absent
TS28: liver Absent
TS28: pancreas Absent
TS28: salivary gland Absent
TS28: adrenal gland Absent
TS28: pituitary gland Absent
TS28: thyroid gland Absent
TS28: bone marrow Absent
TS28: spleen Absent
TS28: lymph node Absent
TS28: thymus Absent
TS28: ear Absent
TS28: skin Absent
TS28: anterior prostate gland Absent
TS28: penis Absent
TS28: seminal vesicle Absent
TS28: testis Absent
TS28: skeletal muscle Absent
TS28: cerebellum Absent
TS28: sciatic nerve Absent
TS28: spinal cord Absent
TS28: lung Absent
TS28: metanephros Absent
TS28: bladder Absent

Specimen Mouse 214961: postnatal day 56; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: pituitary gland Absent
TS28: cervix uteri Absent
TS28: ovary Absent
TS28: oviduct Absent
TS28: uterus Absent
TS28: vagina Absent
TS28: bone marrow Absent
TS28: thymus Absent
TS28: Harderian gland Absent
TS28: brain Moderate There is scattered expression in the brain.
TS28: cerebellum Absent
TS28: telencephalon Moderate There is scattered expression in the cerebrum.
TS28: brainstem Weak There is scattered expression in the brainstem.
TS28: spinal cord Absent
TS28: eye Absent
TS28: bladder Strong Regionally restricted Expression is frequently seen in the ganglia.

Specimen Mouse 215796 - Image 96571503: postnatal day 68; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: brain Strong 96571503 There is scattered expression in the brain.
TS28: telencephalon Strong 96571503 There is scattered expression in the cerebrum.

Specimen Mouse 215796 - Image 96571818: postnatal day 68; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: brainstem Moderate 96571818 There is scattered expression in the brainstem.

Specimen Mouse 215796: postnatal day 68; Scn9atm1Dgen/Scn9a+ (more )
Structure Level Pattern Image Note
TS28: cerebellum Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/28/2022
MGI 6.20
The Jackson Laboratory