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Gene Expression Data
Assay Details
Assay
Reference: J:101679 Deltagen Inc, NIH initiative supporting placement of Deltagen, Inc. mice into public repositories. MGI Direct Data Submission. 2005;
Assay type: RT-PCR
MGI Accession ID: MGI:3625119
Gene symbol: Scn9a
Gene name: sodium channel, voltage-gated, type IX, alpha
Probe: 1217-pA, 1217-pB
Assay notes: This was a TaqMan assay.
Results
 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified Amount Genetic BackgroundMutant Allele(s)Sex Note
brain - total P TS28: brain Moderate Not Specified involves: C57BL/6 Not Specified
cortex P TS28: cerebral cortex Moderate Not Specified involves: C57BL/6 Not Specified
brain medulla P TS28: medulla oblongata Present (a) Not Specified involves: C57BL/6 Not Specified This tissue is sometimes referred to as subcortical region.
cerebellum P TS28: cerebellum Present (a) Not Specified involves: C57BL/6 Not Specified
brainstem P TS28: brainstem Present (a) Not Specified involves: C57BL/6 Not Specified
olfactory bulb P TS28: main olfactory bulb Moderate Not Specified involves: C57BL/6 Not Specified
spinal cord P TS28: spinal cord Moderate Not Specified involves: C57BL/6 Not Specified
eye P TS28: eye Moderate Not Specified involves: C57BL/6 Not Specified
harderian gland P TS28: Harderian gland Weak Not Specified involves: C57BL/6 Not Specified
heart P TS28: heart Weak Not Specified involves: C57BL/6 Not Specified
lung P TS28: lung Absent Not Specified involves: C57BL/6 Not Specified
liver P TS28: liver Absent Not Specified involves: C57BL/6 Not Specified
pancreas P TS28: pancreas Weak Not Specified involves: C57BL/6 Not Specified
kidney P TS28: metanephros Absent Not Specified involves: C57BL/6 Not Specified
spleen P TS28: spleen Weak Not Specified involves: C57BL/6 Not Specified
thymus P TS28: thymus Weak Not Specified involves: C57BL/6 Not Specified
lymph nodes P TS28: lymph node Weak Not Specified involves: C57BL/6 Not Specified
bone marrow P TS28: bone marrow Absent Not Specified involves: C57BL/6 Not Specified
skin P TS28: skin Weak Not Specified involves: C57BL/6 Not Specified
gallbladder P TS28: gallbladder Weak Not Specified involves: C57BL/6 Not Specified
urinary bladder P TS28: bladder Weak Not Specified involves: C57BL/6 Not Specified
pituitary gland P TS28: pituitary gland Moderate Not Specified involves: C57BL/6 Not Specified
adrenal gland P TS28: adrenal gland Moderate Not Specified involves: C57BL/6 Not Specified
salivary gland P TS28: salivary gland Weak Not Specified involves: C57BL/6 Not Specified
skeletal muscle P TS28: skeletal muscle Weak Not Specified involves: C57BL/6 Not Specified
tongue P TS28: tongue Weak Not Specified involves: C57BL/6 Not Specified
stomach P TS28: stomach Weak Not Specified involves: C57BL/6 Not Specified
small intestine P TS28: small intestine Weak Not Specified involves: C57BL/6 Not Specified
large intestine P TS28: large intestine Weak Not Specified involves: C57BL/6 Not Specified This tissue is sometimes referred to as colon.
cecum P TS28: cecum Weak Not Specified involves: C57BL/6 Not Specified
testis P TS28: testis Weak Not Specified involves: C57BL/6 Male
epididymis P TS28: epididymis Weak Not Specified involves: C57BL/6 Male
seminal vesicle P TS28: seminal vesicle Weak Not Specified involves: C57BL/6 Male
coagulating gland P TS28: anterior prostate gland Weak Not Specified involves: C57BL/6 Male
prostate gland P TS28: prostate gland Moderate Not Specified involves: C57BL/6 Male
ovary P TS28: ovary Weak Not Specified involves: C57BL/6 Female
uterus P TS28: uterus Absent Not Specified involves: C57BL/6 Female
white fat P TS28: white fat Weak Not Specified involves: C57BL/6 Not Specified
Notes:
(a) This is one of the tissues with the highest expression level.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/28/2022
MGI 6.20
The Jackson Laboratory