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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Pax2tm1Pgr
targeted mutation 1, Peter Gruss
MGI:1857673
Summary 10 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Pax2tm1Pgr/Pax2tm1Pgr involves: 129S1/Sv * 129X1/SvJ MGI:2677317
hm2
Pax2tm1Pgr/Pax2tm1Pgr involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:3694699
hm3
Pax2tm1Pgr/Pax2tm1Pgr involves: 129S1/Sv * 129X1/SvJ * C57BL/6J MGI:3714946
ht4
Pax2tm1Pgr/Pax2+ involves: 129S1/Sv * 129X1/SvJ MGI:3694692
ht5
Pax2tm1Pgr/Pax2+ involves: 129S1/Sv * 129X1/SvJ * C57BL/6J MGI:3714949
ht6
Pax2tm1Pgr/Pax2+ involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ MGI:5295935
ht7
Pax2tm1Pgr/Pax2+ involves: 129/Sv * 129S1/Sv * 129X1/SvJ * C57BL/6J MGI:3714953
cx8
Eya1tm1Rilm/Eya1+
Pax2tm1Pgr/Pax2+
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J MGI:3715118
cx9
Pax2tm1Pgr/Pax2+
Rettm1Cos/Ret+
involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ MGI:5295884
cx10
Eya1tm1Rilm/Eya1+
Pax2tm1Pgr/Pax2+
Six1tm1Mair/Six1+
involves: 129/Sv * 129S1/Sv * 129X1/SvJ * C57BL/6J MGI:3715233


Genotype
MGI:2677317
hm1
Allelic
Composition
Pax2tm1Pgr/Pax2tm1Pgr
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• at E17.5, male homozygotes lack seminal vesicles
• at E17.5, female homozygotes lack oviducts
• at E17.5, female homozygotes lack uterine horns
• at E17.5, female homozygotes lack a vagina
• at E17.5, male homozygotes lack efferent ducts of the testis
• at E17.5, male homozygotes lack an epididymis
• at E17.5, male homozygotes lack a vas deferens

renal/urinary system
• mesenchyme of the nephrogenic cord fails to undergo epithelial transformation and is unable to form mesonephric tubules
• metanephric induction fails as ureter buds are absent
• metanephric development does not occur
• at E17.5, homozygotes invariably lack both kidneys
• at E17.5, homozygotes invariably lack both ureters
• both sexes lack the entire genital tracts
• homozygotes fail to develop ureteric buds

endocrine/exocrine glands
• at E17.5, male homozygotes lack seminal vesicles

embryo
• homozygotes exhibit impaired differentiation of intermediate mesoderm-derived structures; as a result, kidneys, ureters, and genital tracts fail to form
• in contrast, endoderm-derived structures, such as the bladder, urethra and prostate gland appear normal
• at E12.5, homozygotes fail to develop mesonephric tubules, indicating impaired epithelial transition into the nephrogenic cord
• by E16.5, the parts of Mullerian ducts initially formed have degenerated and are contained within the remnant of urogenital ridges flanking the gonads
• at E13.5, mutant Mullerian ducts are only present at the uppermost parts of the genital ridge, whereas wild-type ducts are found along the entire length of the genital ridge and have reached the cloaca
• by E12.5, the parts of Wolffian ducts initially formed are degenerating (or absent) and contained within the remnant of urogenital ridges flanking the gonads
• at E10.5, mutant Wolffian ducts fail to reach the cloaca
• at E11.5, mutant Wolffian ducts do not extend beyond somite 25
• at E9.0, mutant cephalic folds fail to fuse at the midbrain region

nervous system
• homozygotes show abnormal axonal pathways along the optic stalks and ventral diencephalon
• at E9.0, mutant cephalic folds fail to fuse at the midbrain region
• homozygotes show gross alteration in midbrain and anterior hindbrain morphology
• optic tracts remain totally ipsilateral due to agenesis of the optic chiasma; no contralateral projections are observed
• homozygotes display an abnormal basis of diencephalon, where no optic chiasma is observed
• at E11.5, homozygotes display exencephaly from the anterior hindbrain to the posterior forebrain
• the extesion of exencephaly is only slightly variable among individuals and is not genotype-dependent
• when present, exencephaly is of similar severity in homozygous and heterozygous mutant mice
• at E17, the spiral ganglion is entirely absent
• at E17, the optic nerve is abnormally coated by pigmented cells and glial cells are absent
• the mutant optic nerve consists of a single bundle of axons and is of reduced diameter, probably due to absence of cell bodies bewteen axons
• mutant optic fibers project exclusively to the ipsilateral side without reaching the midline at the optic recess at the base of the diencephalon
• as a result, the insertion of the optic nerve occurs more laterally than in wild-type mice
• agenesis of the optic chiasma
• at E13.5, the cochlear root of the vestibulocochlear nerve is absent

vision/eye
• at E17, the optic nerve is abnormally coated by pigmented cells and glial cells are absent
• the mutant optic nerve consists of a single bundle of axons and is of reduced diameter, probably due to absence of cell bodies bewteen axons
• mutant optic fibers project exclusively to the ipsilateral side without reaching the midline at the optic recess at the base of the diencephalon
• as a result, the insertion of the optic nerve occurs more laterally than in wild-type mice
• agenesis of the optic chiasma
• at E17, pigmentation of the outer retina cells abnormally extends into the optic stalk region and thus surrounds the optic nerve
• Background Sensitivity: the extent of pigmentation into the optic stalk is background-dependent, ranging from 50% to practically all of the stalk extension up to the diencephalon
• at E13, the converging neuroepithelial lips of the prospective retina seem to contact each other, but the basal lamina persists precluding the closure of optic fissure
• despite an open optic fissure, both retinal layers appear normal at birth with respect to cell type composition
• optic stalk cells fail to differentiate into glial cells of the optic nerve
• the pigmented cell phenotype extends into the optic stalk region and surrounds the optic nerve
• Background Sensitivity: the extent of pigmentation into the optic stalk is background-dependent, ranging from 50% to practically all of the stalk extension up to the diencephalon
• homozygotes fail to close the optic fissure and display complete bilateral coloboma at birth

pigmentation
• at E17, pigmentation of the outer retina cells abnormally extends into the optic stalk region and thus surrounds the optic nerve
• Background Sensitivity: the extent of pigmentation into the optic stalk is background-dependent, ranging from 50% to practically all of the stalk extension up to the diencephalon

hearing/vestibular/ear
• at E17, none of the cell types of the organ of Corti are identified
• at E13.5, the cochlear duct fails to elongate from the ventral portion of the otic vesicle and remains amorphic
• at E17, the cochlea is entirely agenic and remains as a ball-shaped simple epithelium (J:36834)
• in contrast, vestibular and saccular structures develop rather normally (J:36834)
• Background Sensitivity: the cochlear phenotype is more severe on a 129/Sv genetic background (cochlear agenesis) than on a mixed 129/Sv x C57BL/6 background (rudimentary cochlea) (J:92326)

cellular
• homozygotes show abnormal axonal pathways along the optic stalks and ventral diencephalon

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
renal coloboma syndrome DOID:0090006 OMIM:120330
J:36834




Genotype
MGI:3694699
hm2
Allelic
Composition
Pax2tm1Pgr/Pax2tm1Pgr
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E15.5, homozygotes exhibit mild to severe inner ear defects
• notably, inner ears are more severely affected in mutants with exencephaly
• at E12, the cochlear region is wider than normal and displays a stunted ventral extension
• at E11.5, cochlear outgrowth is arrested due to increased apoptosis of cells in the cochlear anlage; however, apoptosis within the otic epithelia is greatly reduced by E12.5
• a rudimentary cochlea is always present in all mutant inner ears
• Background Sensitivity: the cochlear phenotype is more severe on a 129/Sv genetic background (cochlear agenesis) than on a mixed 129/Sv x C57BL/6 background
• at E15.5, the cochlear duct is medially displaced in 15 of 17 cases due to the exencephaly
• at E15.5, only a rudimentary organ of Corti is observed
• homozygotes exhibit aberrant locations of neural crest-derived melanocytes, suggesting impaired cell fate specification
• at E15.5, the cochlear duct shows less than a signle turn
• at E15.5, 15 of 17 homozygotes display misoriented inner ears with laterally displaced ampullae and SCCs as a result of exencephaly
• the diameter of SCCs is sometimes smaller or slightly larger than normal
• at E15.5, the endolymphatic duct is invariably fused with the common crus
• the size of ampullae are sometimes smaller or slightly larger than normal
• at E15.5, 8 of 12 mutant inner ears show a distinct but smaller macula sacculi
• in contrast, the macula utriculi remains unaffected
• at E15.5, most mutant inner ears lack a well-defined saccule
• at E12, the endolymphatic duct is either shorter and broader or smaller than normal
• at E15.5, the endolymphatic duct is invariably fused with the common crus

nervous system
• at E15.5, most homozygotes lack a spiral ganglion
• at E15.5, 5 of 8 homozygotes display a reduced vestibular ganglion

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
renal coloboma syndrome DOID:0090006 OMIM:120330
J:92326




Genotype
MGI:3714946
hm3
Allelic
Composition
Pax2tm1Pgr/Pax2tm1Pgr
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E17.5, paintfilling indicates that a cochlea-like structure is present but it is severely malformed
• at E17.5, the saccule and utricle are found in a large single chamber without subdivision
• however, all three semicircular canals and ampullae are present
• at E17.5, no normal endolymphatic duct is observed




Genotype
MGI:3694692
ht4
Allelic
Composition
Pax2tm1Pgr/Pax2+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• at E17.0, heterozygotes frequently display a thinner cortical region
• heterozygous kidneys are frequently hypoplastic due to calyx reduction
• at E17.5, heterozygotes display a reduced kidney size, ranging form 1/10 of normal size to wild-type size
• heterozygotes frequently develop renal hypoplasia, mainly due to reduced calyces and upper part of the ureters, suggesting defects in ureter branching and/or cell proliferation
• heterozygotes frequently display a reduced number of developing nephrons

nervous system
• Background Sensitivity: in heterozygotes, incidence of exencephaly is 11 of 59 cases in a 129/Sv x NMRI mixed background, 1 of 29 in a 129/Sv x C57BL/6 mixed background, 2 of 11 in a 129/Sv x C3H mixed background, and none out of 14 in a 129/Sv inbred background
• heterozygous embryos exhibit exencephaly with a low penetrance and in a background-dependent fashion
• some heterozygotes exhibit optic nerve coloboma

vision/eye
• some heterozygotes exhibit optic nerve coloboma

hearing/vestibular/ear
N
• exencephalic heterozygotes do NOT display overt abnormalities in inner ear development

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
renal coloboma syndrome DOID:0090006 OMIM:120330
J:36834




Genotype
MGI:3714949
ht5
Allelic
Composition
Pax2tm1Pgr/Pax2+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E17.5, 13 of 24 heterozygous mutant inner ears (7 of 12 embryos) display a slight reduction in their overall volume with thinner ducts
• however, all heterozygotes show normal inner ear gross structures
• at E17.5, 6 of 24 heterozygous mutant inner ears (4 of 12 embryos) exhibit slightly shortened cochlea but complete 1.5 turns
• at E17.5, 16 of 24 heterozygous mutant cochleae (9 of 12 embryos) coil between 1.5 and 1.75 turns, 3 of 24 (2 embryos) coil between 1.25 and 1.5 turns, and 2 of 24 (2 embryos) coil between 1.0 and 1.25 turns; no less than 1.0 turns are observed




Genotype
MGI:5295935
ht6
Allelic
Composition
Pax2tm1Pgr/Pax2+
Genetic
Background
involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• at P15, heterozygotes display a reduced mean glomerular density (5.79 glomeruli per unit area) relative to wild-type (8.95 glomeruli per unit area) and single Rettm1Cos heterozygous (7.25 glomeruli per unit area) in littermates
• at P15, heterozygotes show a significantly reduced kidney to body mass ratio (0.56%) relative to wild-type (0.75%) and single Rettm1Cos heterozygous (0.75%) littermates
• at E18.5, heterozygotes show a significantly reduced kidney to body mass ratio (0.26%) relative to wild-type (0.42%) and single Rettm1Cos heterozygous (0.45%) littermates




Genotype
MGI:3714953
ht7
Allelic
Composition
Pax2tm1Pgr/Pax2+
Genetic
Background
involves: 129/Sv * 129S1/Sv * 129X1/SvJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E17.5, 11 of 20 double heterozygous mutant inner ears (6 of 10 embryos) display a slight reduction in their overall volume relative to control mice
• however, all double heterozygotes show normal inner ear gross structures
• at E17.5, 10 of 20 double heterozygous mutant inner ears (6 of 10 embryos) display a slightly shortened cochlea but reach 1.5 turns
• at E17.5, only 1 of 20 heterozygous mutant cochleas (1 of 10 embryos) coils between 1 and 1.25 turns whereas 10 of 20 cochleas (6 of 10 embryos) coil between 1.5 and 1.75 turns




Genotype
MGI:3715118
cx8
Allelic
Composition
Eya1tm1Rilm/Eya1+
Pax2tm1Pgr/Pax2+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Eya1tm1Rilm mutation (1 available); any Eya1 mutation (54 available)
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E17.5, 4 of 24 double heterozygous mutant inner ears (2 of 12 embryos) display a malformed cochlea with enlarged and mal-shaped distal tips
• at E17.5, 6 of 24 double heterozygous mutant cochleae (4 of 12 embryos) only reach 1 and 1.25 turns while 12 of 24 cochleae (8 of 12 embryos) coil between 1.5 and 1.75 turns
• at E17.5, 5 of 24 double heterozygous mutant inner ears (3 of 12 embryos) display a small lateral semicircular canal
• at E17.5, 2 of 24 double heterozygous mutant inner ears (1 of 12 embryos) show absence of the posterior ampullae and truncation of the posterior semicircular canals
• at E17.5, 5 of 24 double heterozygous mutant inner ears (3 of 12 embryos) display a small posterior semicircular canal
• at E17.5, 18 of 24 double heterozygous mutant inner ears (10 of 12 embryos) display significantly smaller or morphologically unidentifiable ampullae
• at E17.5, 5 of 24 double heterozygous mutant inner ears (3 of 12 embryos) display a small anterior semicircular canal
• at E17.5, 18 of 24 double heterozygous mutant inner ears (10 of 12 embryos) display smaller or malshaped sacculae
• at E17.5, 2 of 24 double heterozygous mutant inner ears (2 of 12 embryos) display a truncated endolymphatic duct/sac




Genotype
MGI:5295884
cx9
Allelic
Composition
Pax2tm1Pgr/Pax2+
Rettm1Cos/Ret+
Genetic
Background
involves: 129S/SvEv * 129S1/Sv * 129X1/SvJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
Rettm1Cos mutation (2 available); any Ret mutation (53 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• double heterozygotes are significantly underrepresented at weaning, probably due to postnatal renal insufficiency in a subset of newborns

renal/urinary system
• at P15, double heterozygotes show a significant reduction of ~49%, 37% and 22% in mean glomerular density (4.57 glomeruli per unit area) relative to wild-type (8.95 glomeruli per unit area), single Rettm1Cos heterozygotes (7.25 glomeruli per unit area) and single Pax2tm1Pgr heterozygotes (5.79 glomeruli per unit area), respectively
• at P15, double heterozygotes show a significantly reduced kidney to body mass ratio (0.56%) relative to wild-type (0.75%) or single Rettm1Cos heterozygous (0.75%) littermates
• at E18.5, double heterozygotes show a significantly reduced kidney to body mass ratio (0.23%) relative to wild-type (0.42%) or single Rettm1Cos heterozygous (0.45%) littermates
• at E18.5, about 13% of double heterozygotes display bilateral renal agenesis
• at E18.5, about 52% of double heterozygotes display unilateral renal agenesis
• at P15, about 15% of double heterozygotes exhibit unilateral renal agenesis, suggesting postnatal death most likely due to renal hypoplasia and insufficiency
• at E18.5, the ipsilateral ureters of agenic kidney(s) are also absent
• however, the adrenal glands, bladder and genitals are still present in all instances of renal agenesis
• in culture, both E11.5 and E12.5 kidney explants show a stunted pattern of branching morphogenesis with a significantly lower number of branch points relative to wild-type and single Rettm1Cos heterozygous explants




Genotype
MGI:3715233
cx10
Allelic
Composition
Eya1tm1Rilm/Eya1+
Pax2tm1Pgr/Pax2+
Six1tm1Mair/Six1+
Genetic
Background
involves: 129/Sv * 129S1/Sv * 129X1/SvJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Eya1tm1Rilm mutation (1 available); any Eya1 mutation (54 available)
Pax2tm1Pgr mutation (1 available); any Pax2 mutation (44 available)
Six1tm1Mair mutation (0 available); any Six1 mutation (18 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• at E17.5, 8 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display a severely malformed cochlea with severely malformed distal tips
• at E17.5, 1 of 8 triple heterozygous mutant cochleae (1 of 4 embryos) coil between 1.0 and 1.25 turns, and 7 of 8 cochleae (4 of 4 embryos) coil less than 1.0 turn
• within the semicircular canals, a narrower lumen is observed in some areas
• at E17.5, 8 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display a small lateral semicircular canal
• at E17.5, 4 of 8 triple heterozygous mutant inner ears (3 of 4 embryos) display a small posterior semicircular canal while 4 of 8 (3 of 4 embryos) show a truncated posterior semicircular canal
• at E17.5, 4 of 8 triple heterozygous mutant inner ears (3 of 4 embryos) display significantly smaller posterior ampullae while 4 of 8 ears (3 of 4 embryos) lack posterior ampullae
• at E17.5, 4 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display significantly smaller anterior ampullae
• at E17.5, 4 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display significantly smaller lateral ampullae
• at E17.5, 8 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display a small anterior semicircular canal
• at E17.5, 8 of 8 triple heterozygous mutant inner ears (from all 4 embryos) display a small or malformed saccula
• at E17.5, 2 of 8 triple heterozygous mutant inner ears (1 of 4 embryos) display a truncated endolymphatic duct/sac





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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory