Smyd3^{Gt(AS0527)Wtsi}
Gene trapped Allele Detail

Summary

• Symbol: Smyd3^{Gt(AS0527)Wtsi}
• Name: SET and MYND domain containing 3; gene trap AS0527, Wellcome Trust Sanger Institute
• MGI ID: MGI:4346714
• Gene: Smyd3 Location: Chr1:178779525-179345606 bp, - strand Genetic Position: Chr1, 83.48 cM, cytoband H3
• Alliance: Smyd3^{Gt(AS0527)Wtsi} page

Mutation origin

• Mutant Cell Line: AS0527
• Germline Transmission: Earliest citation of germline transmission: J:231688
• Parent Cell Line: E14TG2a.4 (ES Cell)
• Strain of Origin: 129P2/OlaHsd
• Project Collection: Sanger Inst. Gene Trap Res.

Mutation description

• Allele Type: Gene trapped (Null/knockout)
• Mutation: Insertion of gene trap vector Vector: pGT0lxr
• Mutation details: A selection cassette, containing the splice acceptor site from mouse EN2 exon 2 followed by the Betageo gene and the SV40 polyadenylation sequence, was inserted into the fifth intron of the gene. (J:231688)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  AS0527	CL569988 ; (MGI Seq Detail)	5' RACE	Chr1:179232847-179232983 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  26 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:

1 RNA-Seq or microarray experiment(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 1 strain available Cell Lines: 0 lines available
• Carrying any Smyd3 Mutation: 40 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 2 reference(s)