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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827466
Gene symbol: Psd4
Gene name: pleckstrin and Sec7 domain containing 4
Probe: MGC clone 95956
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006060_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_01
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_01
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_01
TS23: hindbrain Strong Regionally restricted euxassay_006060_01
TS23: neural retina Strong Spotted euxassay_006060_01
Specimen euxassay_006060_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_02
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_02
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_02
TS23: hindbrain Strong Regionally restricted euxassay_006060_02
TS23: neural retina Strong Spotted euxassay_006060_02
Specimen euxassay_006060_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_03
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_03
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_03
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_03
TS23: hindbrain Strong Regionally restricted euxassay_006060_03
TS23: neural retina Strong Spotted euxassay_006060_03
Specimen euxassay_006060_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_04
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_006060_04
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006060_04
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_04
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_04
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_04
TS23: hindbrain Strong Regionally restricted euxassay_006060_04
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_04
Specimen euxassay_006060_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_05
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_05
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_05
TS23: hindbrain Strong Regionally restricted euxassay_006060_05
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_05
Specimen euxassay_006060_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_06
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_06
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_06
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_06
TS23: hindbrain Strong Regionally restricted euxassay_006060_06
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_06
Specimen euxassay_006060_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006060_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_07
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_07
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_07
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_07
TS23: hindbrain Strong Regionally restricted euxassay_006060_07
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_07
Specimen euxassay_006060_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_08
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_08
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_08 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_08
TS23: hindbrain Strong Regionally restricted euxassay_006060_08
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_08
Specimen euxassay_006060_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_09
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_09 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_09
TS23: hindbrain Strong Regionally restricted euxassay_006060_09
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_09
Specimen euxassay_006060_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_10
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_10
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_10
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_10 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_10
TS23: hindbrain Strong Regionally restricted euxassay_006060_10
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_10
Specimen euxassay_006060_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_11
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_11
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_11
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_11 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_11
TS23: hindbrain Strong Regionally restricted euxassay_006060_11
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_11
Specimen euxassay_006060_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_12
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_12
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_12
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_12
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_12 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_12
TS23: hindbrain Strong Regionally restricted euxassay_006060_12
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_12
Specimen euxassay_006060_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006060_13
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_13
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_13 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_13
TS23: spinal cord mantle layer Strong Single cells euxassay_006060_13
Specimen euxassay_006060_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006060_14
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_14
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_14 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_14
Specimen euxassay_006060_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_15
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_15
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_15
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_15 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
TS23: midbrain mantle layer Strong Regionally restricted euxassay_006060_15
Specimen euxassay_006060_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_16
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_16
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_16
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_006060_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_006060_16 prosomere 1 (pretectum) and prosomere 3 (prethalamus)
Specimen euxassay_006060_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_006060_17
TS23: olfactory cortex mantle layer Strong Uniform euxassay_006060_17
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_17
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_17
Specimen euxassay_006060_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_18
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_18
Specimen euxassay_006060_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_19
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_19
Specimen euxassay_006060_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_20
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_20
Specimen euxassay_006060_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_21
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_21
TS23: neural retina Strong Spotted euxassay_006060_21
Specimen euxassay_006060_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_006060_22
TS23: telencephalon mantle layer Strong Uniform euxassay_006060_22
TS23: neural retina Strong Spotted euxassay_006060_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory