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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827030
Gene symbol: Pak1
Gene name: p21 (RAC1) activated kinase 1
Probe: T36738
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007683_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_01
TS23: telencephalon Moderate Uniform euxassay_007683_01
Specimen euxassay_007683_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_02
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_02
TS23: mandible Moderate Regionally restricted euxassay_007683_02
TS23: telencephalon Moderate Uniform euxassay_007683_02
Specimen euxassay_007683_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_03
TS23: mandible Moderate Regionally restricted euxassay_007683_03
TS23: hindbrain Moderate Uniform euxassay_007683_03
TS23: telencephalon Moderate Uniform euxassay_007683_03
Specimen euxassay_007683_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_04
TS23: mandible Moderate Regionally restricted euxassay_007683_04
TS23: maxilla Weak Regionally restricted euxassay_007683_04
TS23: hindbrain Moderate Uniform euxassay_007683_04
TS23: telencephalon Moderate Uniform euxassay_007683_04
Specimen euxassay_007683_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_05
TS23: maxilla Weak Regionally restricted euxassay_007683_05
TS23: mandible Weak Regionally restricted euxassay_007683_05
TS23: telencephalon Moderate Uniform euxassay_007683_05
TS23: hindbrain Moderate Uniform euxassay_007683_05
TS23: midbrain Moderate Uniform euxassay_007683_05
Specimen euxassay_007683_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007683_06
TS23: upper jaw molar Strong Regionally restricted euxassay_007683_06
TS23: lower jaw molar Strong Regionally restricted euxassay_007683_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_06
TS23: telencephalon Moderate Uniform euxassay_007683_06
TS23: hindbrain Moderate Uniform euxassay_007683_06
TS23: midbrain Moderate Uniform euxassay_007683_06
Specimen euxassay_007683_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Moderate Regionally restricted euxassay_007683_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_07
TS23: upper jaw molar Strong Regionally restricted euxassay_007683_07
TS23: lower jaw molar Strong Regionally restricted euxassay_007683_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_07
TS23: diencephalon Moderate Uniform euxassay_007683_07
TS23: telencephalon Moderate Uniform euxassay_007683_07
TS23: hindbrain Moderate Uniform euxassay_007683_07
TS23: midbrain Moderate Uniform euxassay_007683_07
Specimen euxassay_007683_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007683_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_007683_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007683_08
TS23: midbrain Moderate Uniform euxassay_007683_08
TS23: hindbrain Moderate Uniform euxassay_007683_08
TS23: telencephalon Moderate Uniform euxassay_007683_08
TS23: diencephalon Moderate Uniform euxassay_007683_08
Specimen euxassay_007683_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Weak Regionally restricted euxassay_007683_09
TS23: lower jaw incisor Weak Regionally restricted euxassay_007683_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_09
TS23: spinal cord Moderate Uniform euxassay_007683_09
TS23: midbrain Moderate Uniform euxassay_007683_09
TS23: hindbrain Moderate Uniform euxassay_007683_09
TS23: telencephalon Moderate Uniform euxassay_007683_09
TS23: diencephalon Moderate Uniform euxassay_007683_09
Specimen euxassay_007683_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Weak Regionally restricted euxassay_007683_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_007683_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_10
TS23: spinal cord Moderate Uniform euxassay_007683_10
TS23: midbrain Moderate Uniform euxassay_007683_10
TS23: hindbrain Moderate Uniform euxassay_007683_10
TS23: telencephalon Moderate Uniform euxassay_007683_10
TS23: diencephalon Moderate Uniform euxassay_007683_10
Specimen euxassay_007683_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_11
TS23: spinal cord Moderate Uniform euxassay_007683_11
TS23: midbrain Moderate Uniform euxassay_007683_11
TS23: hindbrain Moderate Uniform euxassay_007683_11
TS23: diencephalon Moderate Uniform euxassay_007683_11
TS23: telencephalon Moderate Uniform euxassay_007683_11
Specimen euxassay_007683_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_007683_12
TS23: diencephalon Moderate Uniform euxassay_007683_12
TS23: hindbrain Moderate Uniform euxassay_007683_12
TS23: midbrain Moderate Uniform euxassay_007683_12
TS23: spinal cord Moderate Uniform euxassay_007683_12
Specimen euxassay_007683_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Moderate Regionally restricted euxassay_007683_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_007683_13
TS23: diencephalon Moderate Uniform euxassay_007683_13
TS23: telencephalon Moderate Uniform euxassay_007683_13
TS23: hindbrain Moderate Uniform euxassay_007683_13
TS23: midbrain Moderate Uniform euxassay_007683_13
TS23: spinal cord Moderate Uniform euxassay_007683_13
Specimen euxassay_007683_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_007683_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_14
TS23: diencephalon Moderate Uniform euxassay_007683_14
TS23: telencephalon Moderate Uniform euxassay_007683_14
TS23: hindbrain Moderate Uniform euxassay_007683_14
TS23: midbrain Moderate Uniform euxassay_007683_14
TS23: spinal cord Moderate Uniform euxassay_007683_14
Specimen euxassay_007683_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_15
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_15
TS23: vagus ganglion Moderate Regionally restricted euxassay_007683_15
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007683_15
TS23: mandible Moderate Regionally restricted euxassay_007683_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007683_15
TS23: diencephalon Moderate Uniform euxassay_007683_15
TS23: telencephalon Moderate Uniform euxassay_007683_15
TS23: hindbrain Moderate Uniform euxassay_007683_15
TS23: midbrain Moderate Uniform euxassay_007683_15
TS23: spinal cord Moderate Uniform euxassay_007683_15
Specimen euxassay_007683_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007683_16
TS23: upper jaw molar Strong Regionally restricted euxassay_007683_16
TS23: lower jaw molar Strong Regionally restricted euxassay_007683_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_16
TS23: diencephalon Moderate Uniform euxassay_007683_16
TS23: telencephalon Moderate Uniform euxassay_007683_16
TS23: hindbrain Moderate Uniform euxassay_007683_16
TS23: midbrain Moderate Uniform euxassay_007683_16
TS23: spinal cord Moderate Uniform euxassay_007683_16
Specimen euxassay_007683_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007683_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007683_17
TS23: upper jaw molar Strong Regionally restricted euxassay_007683_17
TS23: lower jaw molar Strong Regionally restricted euxassay_007683_17
TS23: mandible Moderate Regionally restricted euxassay_007683_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007683_17
TS23: diencephalon Moderate Uniform euxassay_007683_17
TS23: telencephalon Moderate Uniform euxassay_007683_17
TS23: hindbrain Moderate Uniform euxassay_007683_17
TS23: midbrain Moderate Uniform euxassay_007683_17
Specimen euxassay_007683_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_18
TS23: mandible Moderate Regionally restricted euxassay_007683_18
TS23: telencephalon Moderate Uniform euxassay_007683_18
TS23: hindbrain Moderate Uniform euxassay_007683_18
TS23: midbrain Moderate Uniform euxassay_007683_18
Specimen euxassay_007683_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_19
TS23: facial ganglion Moderate Regionally restricted euxassay_007683_19
TS23: mandible Moderate Regionally restricted euxassay_007683_19
TS23: telencephalon Moderate Uniform euxassay_007683_19
TS23: hindbrain Moderate Uniform euxassay_007683_19
Specimen euxassay_007683_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007683_20
TS23: facial ganglion Moderate Regionally restricted euxassay_007683_20
TS23: mandible Moderate Regionally restricted euxassay_007683_20
TS23: telencephalon Moderate Uniform euxassay_007683_20
TS23: hindbrain Moderate Uniform euxassay_007683_20
Specimen euxassay_007683_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_21
TS23: telencephalon Moderate Uniform euxassay_007683_21
Specimen euxassay_007683_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_22
TS23: telencephalon Moderate Uniform euxassay_007683_22
Specimen euxassay_007683_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007683_23
TS23: telencephalon Moderate Uniform euxassay_007683_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory