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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823080
Gene symbol: Aldh1a3
Gene name: aldehyde dehydrogenase family 1, subfamily A3
Probe: MGC clone 67939
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001618_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_01
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_01
TS23: neural retina Strong Regionally restricted euxassay_001618_01
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_01
TS23: upper leg Strong Regionally restricted euxassay_001618_01
TS23: hand mesenchyme Strong Regionally restricted euxassay_001618_01
Specimen euxassay_001618_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_02
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_02
TS23: neural retina Strong Regionally restricted euxassay_001618_02
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_02
TS23: upper leg Strong Regionally restricted euxassay_001618_02
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_02
TS23: hand mesenchyme Strong Regionally restricted euxassay_001618_02
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_02
TS23: stomach Strong Regionally restricted euxassay_001618_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_02
Specimen euxassay_001618_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_03
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_03
TS23: neural retina Strong Regionally restricted euxassay_001618_03
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_03
TS23: upper leg Strong Regionally restricted euxassay_001618_03
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_03
TS23: stomach Strong Regionally restricted euxassay_001618_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_03
Specimen euxassay_001618_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_04
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_04
TS23: upper leg Strong Regionally restricted euxassay_001618_04
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_04
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_04
TS23: stomach Strong Regionally restricted euxassay_001618_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_04
Specimen euxassay_001618_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_05
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_05
TS23: upper leg Strong Regionally restricted euxassay_001618_05
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_05
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_05
TS23: stomach Strong Regionally restricted euxassay_001618_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_05
Specimen euxassay_001618_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_06
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_06
TS23: renal calyx Strong Regionally restricted euxassay_001618_06
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_06
TS23: stomach Moderate Regionally restricted euxassay_001618_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_06
Specimen euxassay_001618_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_07
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_07
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_07
TS23: renal calyx Strong Regionally restricted euxassay_001618_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_07
TS23: corpus striatum Present euxassay_001618_07
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_07
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_07
TS23: stomach Moderate Regionally restricted euxassay_001618_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_07
Specimen euxassay_001618_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_08
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_08
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_08
TS23: tongue muscle Strong Regionally restricted euxassay_001618_08
TS23: renal calyx Strong Regionally restricted euxassay_001618_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_08
TS23: corpus striatum Present euxassay_001618_08
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_08
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_08
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_08
TS23: stomach Weak Regionally restricted euxassay_001618_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_08
Specimen euxassay_001618_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_09
TS23: tongue muscle Strong Regionally restricted euxassay_001618_09
TS23: renal calyx Strong Regionally restricted euxassay_001618_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_09
TS23: corpus striatum Present euxassay_001618_09
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_09
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_09
TS23: stomach Moderate Regionally restricted euxassay_001618_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_09
TS23: midgut Moderate Regionally restricted euxassay_001618_09 smooth muscle
Specimen euxassay_001618_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_10
TS23: tongue muscle Strong Regionally restricted euxassay_001618_10
TS23: renal calyx Strong Regionally restricted euxassay_001618_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_10
TS23: corpus striatum Present euxassay_001618_10
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_10
TS23: midgut Moderate Regionally restricted euxassay_001618_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_10
Specimen euxassay_001618_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_11
TS23: tongue muscle Strong Regionally restricted euxassay_001618_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001618_11
TS23: corpus striatum Present euxassay_001618_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_11
TS23: midgut Moderate Regionally restricted euxassay_001618_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_11
Specimen euxassay_001618_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_12
TS23: tongue muscle Strong Regionally restricted euxassay_001618_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001618_12
TS23: corpus striatum Present euxassay_001618_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_12
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_12
TS23: midgut Moderate Regionally restricted euxassay_001618_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_12
Specimen euxassay_001618_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_13
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_13
TS23: tongue muscle Strong Regionally restricted euxassay_001618_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_13
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_13
TS23: midgut Moderate Regionally restricted euxassay_001618_13 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_001618_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_13
Specimen euxassay_001618_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_14
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_14
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_001618_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_001618_14
TS23: midgut Moderate Regionally restricted euxassay_001618_14 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_001618_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_14
Specimen euxassay_001618_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_15
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_15
TS23: renal calyx Strong Regionally restricted euxassay_001618_15
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_15
TS23: midgut Moderate Regionally restricted euxassay_001618_15 smooth muscle
TS23: hindgut Moderate Regionally restricted euxassay_001618_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_15
Specimen euxassay_001618_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_16
TS23: renal calyx Strong Regionally restricted euxassay_001618_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_16
TS23: corpus striatum Present euxassay_001618_16
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_16
TS23: midgut Strong Regionally restricted euxassay_001618_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_16
Specimen euxassay_001618_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_17
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_001618_17
TS23: renal calyx Strong Regionally restricted euxassay_001618_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_17
TS23: corpus striatum Present euxassay_001618_17
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_17
TS23: midgut Moderate Regionally restricted euxassay_001618_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_001618_17
Specimen euxassay_001618_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_18
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_18
TS23: renal calyx Strong Regionally restricted euxassay_001618_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_18
TS23: corpus striatum Present euxassay_001618_18
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_18
Specimen euxassay_001618_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_19
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_19
TS23: renal calyx Strong Regionally restricted euxassay_001618_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_001618_19
TS23: corpus striatum Present euxassay_001618_19
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_19
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_19
Specimen euxassay_001618_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_20
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_20
TS23: renal calyx Strong Regionally restricted euxassay_001618_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001618_20
TS23: corpus striatum Present euxassay_001618_20
TS23: upper leg Strong Regionally restricted euxassay_001618_20
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_20
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_20
Specimen euxassay_001618_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_21
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_21
TS23: neural retina Strong Regionally restricted euxassay_001618_21
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_21
TS23: upper leg Strong Regionally restricted euxassay_001618_21
TS23: foot mesenchyme Strong Regionally restricted euxassay_001618_21
TS23: Meckel's cartilage Strong Regionally restricted euxassay_001618_21
Specimen euxassay_001618_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_22
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_22
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_22
TS23: neural retina Strong Regionally restricted euxassay_001618_22
TS23: upper leg Strong Regionally restricted euxassay_001618_22
Specimen euxassay_001618_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_23
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_23
TS23: neural retina Strong Regionally restricted euxassay_001618_23
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_23
TS23: upper leg Strong Regionally restricted euxassay_001618_23
TS23: shoulder mesenchyme Strong Regionally restricted euxassay_001618_23
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_001618_23
Specimen euxassay_001618_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001618_24
TS23: head mesenchyme Strong Regionally restricted euxassay_001618_24
TS23: neural retina Strong Regionally restricted euxassay_001618_24
TS23: cornea epithelium Strong Regionally restricted euxassay_001618_24
TS23: elbow mesenchyme Strong Regionally restricted euxassay_001618_24
TS23: forearm mesenchyme Strong Regionally restricted euxassay_001618_24
TS23: shoulder mesenchyme Strong Regionally restricted euxassay_001618_24
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_001618_24
TS23: upper leg Strong Regionally restricted euxassay_001618_24
TS23: hand mesenchyme Strong Regionally restricted euxassay_001618_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory