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MTF#487 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#487
  • Sequence Type
    cDNA
  • ID
    MGI:3506221
  • Region Covered
    Nucleotides 131-622 of GenBank Accession ID AK005588
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/HindIII
  • Insert Size
    0.491kb
  • Note
    According to the information in Table S7, this fragment was generated by PCR with primers CCCAAGCTTAAAGACCAGCTAAGGCCCAAGG and CCGCTCGAGCCTGCCTTGACATTGGTTGCGG. However, based on the template sequence and author correspondence, that information appears incorrect. Template sequence provided by Paul Gray:
    GNATGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTGATGCTTCCGT
    TTCTCTGCTCCTTGCCGTGGAGAAGGATGGAGCTGCAGCGGTCCAGGATCCTTTCTGGGG
    CGCCCTTCATCACTAGCAGGTGTTTGGGCTCAGATGCATTTGGGTTCTTGTGAATGGACA
    ACTGGTACTTGTTGGTGGAGTTGAAGGGAATCTCCACTATCTTGCTGTATTTCTCCCTCA
    TCTCCATCACGGAGCCGCAGCAGACTTCAATGCACTTTAAGAGCGCCGACTCAGAGGCAT
    CTCCCGCTACTGCCCGCTTAAGAATAGGCAGGTTTTCTTGGTTAGCCTGAAACACTGCCC
    TGTTACAGAGACCAGCAATTCTGGACAGAGCGAACCAGGGGGCTGACGTCTTGTCAAAGG
    AGACACCACTCTGATTCTCCGTGGTGTCAGCTTCATGGATCTGATTGTCAAACCACATGT
    GGGCCACTGTCATCCGGTTCTGAGTCAGAGTTCCCGTCTTGTCTGAGCAGATGGTAGATG
    TGGACCCCAAGGTCTCCACAGCTTCCAAGTTCTTCACCAGGCAGTTCTTCCTCGCCATGC
    GCTTGGCAGTGAGTGTCAGACAGACCGTGACAGTGGCCAGCAGACCTTCTGGCACGTTGG
    CTACGATGATACCAATGAGGAAGATGACAGCCTCGAGCCAGGTGTACTCAAGGAGCAGAG
    AAACGGAAGCATCAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCT
    CGGTACCAAGCTTGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGCGT
    AATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCCACAANAT
    ACGAGCGGAAGCATAANTGTAAAGCCCGGGGGGCCTAATGAGTGAGCNTACTCCATTN.
  • Synonyms
    GUDMAP:5536 probe, maprobe:267
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Atp1a1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
Expression
  • Assay Results
    45
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory