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MTF#179 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#179
  • Sequence Type
    cDNA
  • ID
    MGI:3506049
  • Vector Type
    Plasmid
  • Insert Site
    EcoRI/XhoI
  • Insert Size
    0.772kb
  • Note
    The gene annotated to this probe is based on the authors' assertion and the template sequence. Fragment was generated by PCR with primers CCGGAATTCAAGGGAGAGGTGCTGCGTGTGC and CCGCTCGAGGAGGCAGGCACGGAGACATTGC. Howver, these primers do not match this gene. (They also contain adaptor sequences.) Template sequence provided by Paul Gray:
    TCGAGTATCGCACTCGCTGTCGCTGGATGTGATGGAGATGGCCGAAGTGGCCGCCTTGCT
    CGACAGACTGGCAGCCGGGCTGGAGGCGACGCCCAACACCTCAGGCGTTCCCTCACCCTC
    CGAGCGTAGCACCCGCCCGGGGCCCTGCGACAGAACCCGCTGCTGGAGTCTGTTTTTGGC
    TGCAGCTGCCCGGTCTCTTTGTCTGCGGTTTTTGAACCAGTTGCCCACCTGTGTGGGGGT
    CAGTCCGGTTGCCTGGGCGAGCTCTCGCTTTTTGCTGGGGTTGGGATATGGGTCCTGAAG
    GTACCACTCTCGAAGCAGGTGCCGCGTGCGCTCCTTGAAGCAGTGAGTCTTCTGTTCGCC
    ATCCCAAATGGTCCGCGGCAGCGGGAACTTCTTCCTTACTCGGTACTTGTCTACTGGCCC
    TAGGGGCCGTCCACGCAGCTTCTCTGCCTCCTGGTAATGCGCTTCGAGCCACAGCGCCTG
    CAGCTTGGCGTGCGATTCCTTAGTAAACTTATGATTTTCCAGGATATGATAAAGCTCGCG
    GTAGTTGCCACCGTGGAAAGCCACGATGGCTCTCGCTCGCAGCACCAACTCATTCTTGTT
    AANGGCTTCACAAGCTGCTGGGGCCACGGGCAGCGACCATAGGAAGCGACCGAATTCCTG
    CAGCCCGGGGGATCCACTAGTTCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTG
    TTCCTTTTAGTGAGGGTTAATTTCGAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGT
    GTGAAATTGNTATCCCGCTCACAATTCCACACAACATACGAGCCGGGAAGCATAAAGTGT
    AAAGCCTGGGGGNGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGNC
    CNCTTTCCAGTCNGGAAANCTGTCGTGNCAGCTGCATTNATGAATCGGCCNACGCGCGGG
    GNANAGGCGGTTTGCGTANTGGGGNGCTCTTCCGCTTCCTCGCTCANTGANTCCCTTGCG
    CCTCGGTCGTTCGGGTGCGGGGAGCGGNATCAGCTNACTNAAAGGNGGNNA
  • Synonyms
    GUDMAP:9395 probe, maprobe:125
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Six6 sine oculis-related homeobox 6
Expression
  • Assay Results
    19
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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05/07/2024
MGI 6.23 		The Jackson Laboratory