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MTF#110 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#110
  • Sequence Type
    cDNA
  • ID
    MGI:3505995
  • Vector Type
    Plasmid
  • Insert Site
    BamHI/HindIII
  • Insert Size
    0.782kb
  • Note
    The gene associated with this probe is as reported by the authors and as would be predicted from the primer set used to generate the probe: CGCGGATCCCACCGTCATGTTTCTCTACG and CCCAAGCTTGATAGCTTTCCATGGGAAGCC. (These primers contain adaptor sequences.) However, the template sequence provided maps upstream of the gene on chromosome 6:
    GGCCGCCTGGAATCTACAATTAAAACAAAACCTTAAGGAATGGTAAAGACTGCCAGGTTT
    CCCGACAACCCCACCACAGCGTTAAGTGACAAACTCTAGAGTCAACTCATCAGCCCCTAA
    AACACACAATTTCAGATAAATTATGAATTTTCTCAAATCTTGTAAGTATTTATGTGACCA
    TTATATTTTAGGACACTGTGTTAGATGGTAATCGGAAAACTGGTTACAGAAACAAAGGCT
    GTTTCCACGCAGCTGGTCCAGCACCCTCCCCTTTGCATGTTAAGTGCCTGCTCAGGTAAA
    CCTTATTGAAATCCCTGCCATTGTTCCTTCTGGAAATGTTTCAGGTAGAGGCTTAGAAGG
    GGGAAAGGCACTGAATTGTTTATTTGAACTATTGCTAAAAAGGGAGATGAGAGGAGAGAG
    AACGCTCATCCAAGGATCTATTGTTTTGATAGTAAATCTGGCCAGCTAAACCCTTGAGGT
    TACAAGAGAACCCTGGGTGGGTAAGGAGCTTCTGGAAATACCTTTCAATTGCTTACAACA
    AACATGGTGGATTAACCAACACTGTCAAAGGATTTTTCTACAGGATTTGTTGTAATTTTT
    GAAGTGTTTAAATCTCACCAAATAATACGAAGAATTCACTTTATGCCCCTTCTCCTGGAA
    NGTCCCACCCTAGTATGGATTTCTCCTAAAACATACTCTTTCTTTAAATTTTTTAAANTT
    GGCATTTTCCAATACTTGNTNAACATTTTTGCTAGGGNACATCGNTTTCCCTTTTTTTAC
    TTAAAAAAAAAAAACCTCAAAATGGAAACCCCGTTNTCCCAAAATATTTTAANAGGCCNG
    NCNTCCTAAATTTTNAATTTACCAAANGGATTAGNATTTTTTTTTTTTTTCCTNGGTTAA
    CNGGGGTNAAGAAAACTNGCNGGGCCCACCNNTTNGGGGANANCCNCCCCACCNCGGTTG
    GNAGGCNNNANCCTTGNANNATTCCTNTAGGGGNCCCCCNAAANAAGCCTGGGGGGNAA
  • Synonyms
    GUDMAP:5257 probe, GUDMAP:12141 probe, GUDMAP:12186 probe, GUDMAP:13746 probe, GUDMAP:13747 probe, maprobe:76
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Hoxa13 homeobox A13
Expression
  • Assay Results
    67
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory