Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:63171
Niclou SP, et al., Slit2 is a repellent for retinal ganglion cell axons. J Neurosci. 2000 Jul 1;20(13):4962-74
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
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MGI:7623154
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Gene symbol:
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Slit2
|
Gene name:
|
slit guidance ligand 2
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Probe:
|
Slit2 cDNA
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Probe preparation:
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Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
|
Results
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Specimen
6c:
embryonic day 13.5
(more )
Specimen
6c:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
6d:
embryonic day 16.0
(more )
Specimen
6d:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 16.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Specimen
7a:
embryonic day 12.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
7a:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Specimen
7d:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
7d:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Specimen
7g:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
7g:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: optic stalk |
Present |
Non-Uniform |
7l
,
7j
,
7g
,
7i
|
Expression is most prominent in cells throughout the ventricular lining within the center of the stalk.
|
Specimen
8a:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
8a:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hypothalamus |
Strong |
Regionally restricted |
8c
,
8a
|
Expression is in regions anterior to the path that optic fibers take to the midline and is absent from posterior regions at which retinal fibers cross the ventral midline.
|
TS21: diencephalon |
Present |
Regionally restricted |
8c
,
8a
|
Expression is in the ventral diencephalon but is absent from the path of growing fibers.
|
Specimen
8d:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
8d:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hypothalamus |
Strong |
Regionally restricted |
8f
,
8d
|
Expression is high in the ventral midline of the anterior portion of the hypothalamus and is absent further caudally where retinal ganglion cells axons cross the midline in the chiasm.
|
TS21: diencephalon |
Present |
Regionally restricted |
8d
,
8f
|
Expression is in the ventral diencephalon but is absent from the path of growing fibers.
|
Specimen
8g:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
8g:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hypothalamus |
Strong |
Regionally restricted |
8g
,
8i
|
Expression is in regions anterior to the path that optic fibers take to the midline.
|
Specimen
8j:
embryonic day 13.5
(more )
Note: Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
Specimen
8j:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
Double labeled: blue - Slit2; red - Nefh (assay MGI:7623158).
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: hypothalamus |
Strong |
Regionally restricted |
8j
,
8l
|
Expression is high in the ventral midline of the anterior portion of the hypothalamus and is absent further caudally where retinal ganglion cells axons cross the midline in the chiasm.
|
Specimen
not shown:
embryonic day 13.5
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 13.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS21: optic stalk |
Present |
Regionally restricted |
|
Expression is at the exit of the eye in dorsal stalk cells, between the pigment
epithelial cells and the retinal ganglion cell axons.
|
|