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Gene Expression Data
Assay Details
Assay
Reference: J:316879 Negretti NM, et al., A single-cell atlas of mouse lung development. Development. 2021 Dec 15;148(24):dev199512
Assay type: RNA in situ
MGI Accession ID: MGI:7520018
Gene symbol: Sftpc
Gene name: surfactant associated protein C
Probe: Mm-Sftpc (314101)
Probe preparation: Antisense
Visualized with: Fluorescence
Results
Specimen 3K Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present 3K E15 inset , 3K E15 Expression in type II (AT2) cells.
Specimen 3K Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present 3K P0 , 3K P0 inset Expression in type II (AT2) cells.
Specimen 3K Sftpc P14: postnatal day 14 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present 3K P14 inset , 3K P14 Expression in type II (AT2) cells.
Specimen S3 Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present S3_E15 Sftpc inset , S3_E15 (merge) , S3_E15 (merge) inset , S3_E15 Sftpc Expression in type II (AT2) cells.
Specimen S3 Sftpc E18: embryonic day 18.0 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS26: lung alveolus type II pneumocyte Present S3_E18 (merge) inset , S3_E18 (merge) , S3_E18 Sftpc inset , S3_E18 Sftpc Expression in type II (AT2) cells.
Specimen S3 Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present S3_P0 Sftpc , S3_P0 (merge) , S3_P0 (merge) inset , S3_P0 Sftpc inset Expression in type II (AT2) cells.
Specimen S3 Sftpc P3: postnatal day 3 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present S3_P3 Sftpc isnet , S3_P3 (merge) inset , S3_P3 (merge) , S3_P3 Sftpc Expression in type II (AT2) cells.
Specimen S3 Sftpc P5: postnatal day 5 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S3_P5 Sftpc , S3_P5 (merge) inset , S3_P5 Sftpc inset , S3_P5 (merge) Expression in type II (AT2) cells.
Specimen S3 Sftpc P7: postnatal day 7 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S3_P7 (merge) , S3_P7 (merge) inset , S3_P7 Sftpc inset , S3_P7 Sftpc Expression in type II (AT2) cells.
Specimen S3 Sftpc P14: postnatal day 14 (more )
Note: Triple labeled: green - Sftpc; red - Cdkn1a (assay MGI:7520017); white - Hopx (assay MGI:7520021).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus epithelial cell of lung Present S3_P14 (merge) inset , S3_P14 Sftpc , S3_P14 Sftpc inset , S3_P14 (merge) Expression in type II (AT2) cells.
Specimen 3M Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present 3M E15 inset , 3M E15 Expression in type II (AT2) cells.
Specimen 3M Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present 3M P0 , 3M P0 inset Expression in type II (AT2) cells.
Specimen 3M Sftpc P5: postnatal day 5 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present 3M P5 , 3M P5 inset Expression in type II (AT2) cells.
Specimen S2I Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present S2I E15 , S2I E15 insest Expression in type II (AT2) cells.
Specimen S2I Sftpc E18: embryonic day 18.0 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS26: lung alveolus type II pneumocyte Present S2I E18 inset , S2I E18 Expression in type II (AT2) cells.
Specimen S2I Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus epithelial cell of lung Present S2I P0 inset , S2I P0 Expression in type II (AT2) cells.
Specimen S2I Sftpc P3: postnatal day 3 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present S2I P3 inset , S2I P3 Expression in type II (AT2) cells.
Specimen S2I Sftpc P5: postnatal day 5 (more )
Note: Triple labeled: green - Sftpc; white - Cdkn1a (assay MGI:7520017); red - PanCK.
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S2I P5 inset , S2I P5 Expression in type II (AT2) cells.
Specimen 5G Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present 5G E15 inset , 5G E15 Expression in type II (AT2) cells.
Specimen 5G Sftpc E18: embryonic day 18.0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS26: lung alveolus type II pneumocyte Present 5G E18 inset , 5G E18 Expression in type II (AT2) cells.
Specimen 5G Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present 5G P0 , 5G P0 inset Expression in type II (AT2) cells.
Specimen 5G Sftpc P3: postnatal day 3 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present 5G P3 , 5G P3 inset Expression in type II (AT2) cells.
Specimen S8A Sftpc E15: embryonic day 15.0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS23: lung type II pneumocyte Present S8A E15 inset , S8A E15 Expression in type II (AT2) cells.
Specimen S8A Sftpc E18: embryonic day 18.0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS26: lung alveolus type II pneumocyte Present S8A E18 inset , S8A E18 Expression in type II (AT2) cells.
Specimen S8A Sftpc P0: postnatal day 0 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present S8A P0 , S8A P0 inset Expression in type II (AT2) cells.
Specimen S8A Sftpc P3: postnatal day 3 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS27: lung alveolus type II pneumocyte Present S8A P3 , S8A P3 inset Expression in type II (AT2) cells.
Specimen S8A Sftpc P5: postnatal day 5 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S8A P5 inset , S8A P5 Expression in type II (AT2) cells.
Specimen S8A Sftpc P7: postnatal day 7 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S8A P7 , S8A P7 inset Expression in type II (AT2) cells.
Specimen S8A Sftpc P14: postnatal day 14 (more )
Note: Triple labeled: green - Sftpc; red - Tgfbi (assay MGI:7520038); white - Wnt5a (assay MGI:7520040).
Structure Cell Type Level Pattern Image Note
TS28: lung alveolus type II pneumocyte Present S8A P14 inset , S8A P14 Expression in type II (AT2) cells.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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