Probe:	RORalpha probe1
Probe preparation:	Antisense labelled with digoxigenin RNA
Visualized with:	Alkaline phosphatase

Structure	Cell Type	Level	Pattern	Image	Note
TS28: cerebellum Purkinje cell layer	Purkinje cell	Strong		2B
TS28: cerebellum molecular layer		Present		2B
TS28: cerebellum granule cell layer		Absent		2B

Structure	Level	Pattern	Image	Note
TS28: ventral posterior lateral thalamic nucleus	Strong		2D
TS28: ventral posterior medial thalamic nucleus	Strong		2D
TS28: reticular thalamic nucleus	Absent		2D

Structure	Level	Pattern	Image	Note
TS28: cortical layer IV	Strong		2F , 2F inset

Structure	Level	Pattern	Image	Note
TS28: dorsal cochlear nucleus	Present		3B	Expression level lower than in Purkinje cells and in the thalamus, and approximately equivalent to that in the molecular layer of the cerebellum

Structure	Level	Pattern	Image	Note
TS28: suprachiasmatic nucleus	Present		3D	Moderate to low levels of expression.

Structure	Level	Pattern	Image	Note
TS28: superior colliculus	Weak		3F , 3F inset	Moderate to low levels of expression.
TS28: pineal gland	Weak		3F inset , 3F

Structure	Level	Pattern	Image	Note
TS28: retina ganglion cell layer	Weak		3H , 3H inset	Moderate to low levels of expression.
TS28: retina inner nuclear layer	Weak		3H , 3H inset	Moderate to low levels of expression.

Structure	Level	Pattern	Image	Note
TS24: cerebellum	Strong		6B

Structure	Level	Pattern	Image	Note
TS24: thalamus	Strong		6D

Structure	Level	Pattern	Image	Note
TS28: cerebellum Purkinje cell layer	Very strong
TS28: medial dorsal thalamic nucleus	Strong
TS28: ventral posterior lateral thalamic nucleus	Strong
TS28: ventral posterior medial thalamic nucleus	Strong
TS28: medial geniculate nucleus	Moderate
TS28: suprachiasmatic nucleus	Moderate
TS28: ventral lateral thalamic nucleus	Moderate
TS28: ventral medial thalamic nucleus	Moderate
TS28: adenohypophysis	Weak
TS28: cerebellum molecular layer	Weak
TS28: dorsal cochlear nucleus	Weak
TS28: dorsal lateral geniculate nucleus	Weak
TS28: inferior colliculus	Weak
TS28: inferior olivary nucleus	Weak
TS28: lateral dorsal thalamic nucleus	Weak
TS28: main olfactory bulb glomerular layer	Weak
TS28: main olfactory bulb mitral cell layer	Weak
TS28: neurohypophysis	Weak
TS28: pineal gland	Weak
TS28: retina ganglion cell layer	Weak
TS28: retina inner nuclear layer	Weak
TS28: spinal cord dorsal horn	Weak
TS28: spinal cord ventral horn	Weak
TS28: superior colliculus	Weak
TS28: superior olivary nucleus	Weak
TS28: trigeminal V spinal sensory nucleus	Weak
TS28: trigeminal ganglion	Weak
TS28: cerebral cortex	Weak	Regionally restricted		Expression in parts dorsal to rhinal fissures.
TS28: piriform cortex	Weak	Regionally restricted		Expression in rostral part; no expression in caudal part.
TS28: retina	Weak	Regionally restricted		Expression in inner segment.
TS28: anterior olfactory nucleus	Absent
TS28: basolateral amygdaloid nucleus	Absent
TS28: cerebellum granule cell layer	Absent
TS28: corpus striatum	Absent
TS28: dentate gyrus	Absent
TS28: entorhinal cortex	Absent
TS28: hippocampus pyramidal cell layer	Absent
TS28: lateral amygdaloid nucleus	Absent
TS28: lateral habenular nucleus	Absent
TS28: lateral posterior thalamic nucleus	Absent
TS28: locus coeruleus	Absent
TS28: main olfactory bulb granule cell layer	Absent
TS28: medial amygdaloid nucleus	Absent
TS28: medial habenular nucleus	Absent
TS28: medial mammillary nucleus	Absent
TS28: paraventricular hypothalamic nucleus	Absent
TS28: reticular thalamic nucleus	Absent
TS28: retina outer nuclear layer	Absent
TS28: subiculum	Absent
TS28: substantia nigra	Absent
TS28: telencephalon septum	Absent
TS28: ventral tegmental area	Absent