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Gene Expression Data
Assay Details
Assay
Reference: J:307862 Wilkerson BA, et al., Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. Elife. 2021 May 18;10:e60108
Assay type: RNA in situ
MGI Accession ID: MGI:6828846
Gene symbol: Col2a1
Gene name: collagen, type II, alpha 1
Probe: Col2a1_riboprobe1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 4 S1: embryonic day 15.5 (more )
Note: This specimen was generated by the Allen Developing Mouse Brain Atlas project - RP_080603_04_C09 - sagittal.
Structure Level Pattern Image Note
TS23: semicircular canal epithelium Present Regionally restricted 4 S1_Col2a1 Expression is seen in the dense mesenchyme associated with the ampulla epithelium; it is not seen in the loose epithelium nor the dense mesenchyme associated with the boney otic capsule.
Specimen Not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: vestibular component mesenchyme Present Regionally restricted Expression is seen in the loose mesenchyme surrounding the crista ampullaris; it is not seen in the dense mesenchyme associated with the ampulla epithelium nor the dense mesenchyme near the boney otic capsule.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory