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Col2a1_riboprobe1 Probe Detail
Nucleotide
Probe/Clone
  • Name
    Col2a1_riboprobe1
  • Sequence Type
    cDNA
  • ID
    MGI:6170132
  • Note
    This probe was generated by the Allen Institute for Brain Science. Copyright 2004 Allen Institute for Brain Science. Allen Mouse Brain Atlas. Available from: http://mouse.brain-map.org/. Copyright 2008 Allen Institute for Brain Science. Allen Developing Mouse Brain Atlas. Available from: http://developingmouse.brain-map.org. The probe was generated using PCR; its predicted amplicon based on the genome assembly at the time is:
    GTCCTACTGGAGTGACTGGTCCTAAGGGAGCCCGAGGTGCCCAAGGTCCCCCGGGAGCCA
    CCGGATTCCCTGGAGCTGCTGGCCGAGTTGGACCCCCAGGTGCTAATGGCAATCCTGGAC
    CCGCCGGTCCCCCTGGTCCTGCTGGAAAAGATGGTCCCAAAGGTGTTCGAGGAGACAGTG
    GCCCCCCTGGCAGAGCTGGTGACCCCGGTCTTGAAGGTCCTGCAGGAGCTCCTGGCGAGA
    AAGGAGAACCTGGAGATGATGGTCCCTCTGGTCTTGATGGTCCTCCAGGTCCCCAGGGGC
    TGGCTGGTCAAAGGGGCATTGTTGGTCTGCCTGGTCAGCGTGGTGAGAGAGGATTCCCCG
    GCCTTCCCGGCCCATCGGGTGAGCCCGGCAAGCAGGGTGCACCTGGCGCGTCTGGAGACA
    GAGGTCCTCCTGGTCCTGTGGGGCCTCCTGGCCTGACAGGGCCTGCAGGTGAACCTGGAC
    GAGAGGGCAGCCCTGGTGCTGATGGACCCCCTGGAAGAGATGGTGCAGCTGGAGTCAAGG
    GAGATCGTGGTGAGACTGGAGCACTGGGTGCCCCTGGAGCTCCTGGGCCCCCAGGCTCTC
    CTGGTCCTGCTGGCCCAACTGGCAAACAAGGAGACAGAGGAGAGGCTGGTGCACAAGGTC
    CTATGGGTCCCTCAGGACCTGCTGGAGCCCGTGGGATTGCAGGCCCTCAAGGCCCCCGAG
    GTGACAAAGGAGAATCTG
  • Synonyms
    RP_050623_02_G11, RP_080603_04_C09, RP_090707_03_F10
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL/6J
  • Age
    postnatal
  • Tissue
    brain
Genes
Col2a1 collagen, type II, alpha 1
Expression
  • Assay Results
    9
References
J:262123 Allen Institute for Brain Science, Allen Brain Atlas: mouse riboprobes. Allen Institute. 2004;
J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23
J:307862 Wilkerson BA, et al., Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. Elife. 2021 May 18;10:e60108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory