Gene Expression Data
Assay Details
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Assay
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Reference:
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J:48135
Fernandez AS, et al., Expression of the Emx-1 and Dlx-1 homeobox genes define three molecularly distinct domains in the telencephalon of mouse, chick, turtle and frog embryos: implications for the evolution of telencephalic subdivisions in amniotes. Development. 1998 Jun;125(11):2099-111
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6504216
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Gene symbol:
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Pax6
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Gene name:
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paired box 6
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Probe:
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Pax6 cDNA5
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
5A:
embryonic day 10.5
(more  )
Specimen
5A:
(close  )
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Genetic Background:
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OF1
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: telencephalon |
Present |
Regionally restricted |
5A
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Expression domain in dorsocaudal part of telencephalic vesicle, surrounding palliobasal angle.
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| TS17: telencephalon ventricular layer |
Strong |
Regionally restricted |
5A
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High level of expression in ventricular zone of intermediate domain.
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Specimen
5B:
embryonic day 11.5
(more )
Specimen
5B:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: telencephalon |
Present |
Regionally restricted |
5B
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Expression in pallial region, extending beyond palliobasal angle. Group of expressing postmitotic cells close to striatopallial gnale between Emx1 and Dlx2 domains.
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| TS19: telencephalon ventricular layer |
Strong |
Regionally restricted |
5B
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High level of expression in ventricular zone of intermediate domain.
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Specimen
5C:
embryonic day 12.5
(more )
Specimen
5C:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: telencephalon |
Present |
Regionally restricted |
5C
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Expression in neuroepithelium of pallial and intermediate territories, extending beyond palliobasal angle. Expressing cells displaced superficially but maintaining topographical relationship with striatopallial angle.
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| TS20: telencephalon ventricular layer |
Strong |
Regionally restricted |
5C
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High level of expression in ventricular zone of intermediate domain, both in lateral telencephalic wall and thin medial extension located in septum.
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Specimen
5D:
embryonic day 12.5
(more )
Specimen
5D:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 12.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: telencephalon |
Present |
Regionally restricted |
5D
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Expression in neuroepithelium of pallial and intermediate territories, extending beyond palliobasal angle. Expressing cells displaced superficially but maintaining topographical relationship with striatopallial angle.
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Specimen
5E:
embryonic day 15.5
(more )
Specimen
5E:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: telencephalon |
Present |
Regionally restricted |
5E
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Expression in neuroepithelium of pallial and intermediate territories, extending beyond palliobasal angle. Expressing cells displaced superficially but maintaining topographical relationship with striatopallial angle.
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| TS23: telencephalon septum |
Strong |
Regionally restricted |
5E
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High level of expression in ventricular zone of intermediate domain, both in lateral telencephalic wall and thin medial extension located in septum.
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| TS23: telencephalon ventricular layer |
Strong |
Regionally restricted |
5E
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High level of expression in ventricular zone of intermediate domain, both in lateral telencephalic wall and thin medial extension located in septum.
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Specimen
5F:
embryonic day 15.5
(more )
Specimen
5F:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS23: telencephalon |
Present |
Regionally restricted |
5F
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Expression in neuroepithelium of pallial and intermediate territories, extending beyond palliobasal angle. Expressing cells displaced superficially but maintaining topographical relationship with striatopallial angle.
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Specimen
6D:
embryonic day 15.5
(more )
Specimen
6D:
(close )
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Genetic Background:
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OF1
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Age:
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embryonic day 15.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Analysis Tools