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Gene Expression Data
Assay Details
Assay
Reference: J:210985 Wolfe AD, et al., Mixl1 localizes to putative axial stem cell reservoirs and their posterior descendants in the mouse embryo. Gene Expr Patterns. 2014 May;15(1):8-20
Assay type: In situ reporter (knock in)
MGI Accession ID: MGI:6436904
Gene symbol: Runx1
Gene name: runt related transcription factor 1
Reporter: lacZ
Direct Detection
Results
Specimen 6A: embryonic day 7.5; Runx1tm2Spe/Runx1+ (more )
Note: Early headfold stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS11: allantois Present 6A Expression throughout allantois and visceral yolk sac endoderm.
TS11: yolk sac endoderm Present 6A Expression throughout allantois and visceral yolk sac endoderm.

Specimen 6B: embryonic day 7.5; Runx1tm2Spe/Runx1+ (more )
Note: Early headfold stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS11: allantois Strong Regionally restricted 6B Prominent expression throughout distal allantois, in both core and mesothelium.

Specimen 6C: embryonic day 7.5; Runx1tm2Spe/Runx1+ (more )
Note: Early headfold stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS11: Allantoic Core Domain Present 6C Relatively less intense expression in Allantoic Core Domain.
TS11: allantois-associated posterior visceral endoderm Present Regionally restricted 6C Expression within allantois-associated posterior visceral endoderm near site of presumptive vessel of confluence.

Specimen 6D: embryonic day 8.0; Runx1tm2Spe/Runx1+ (more )
Note: 6 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS11: allantois Present Regionally restricted 6D Expression co-localizing with Runx1 within proximal allantois.

Specimen 6E: embryonic day 8.0; Runx1tm2Spe/Runx1+ (more )
Note: 6 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS12: yolk sac endoderm Present 6E
TS12: blood vessel Present 6E Expression in nascent vasculature and vitelline vessels.
TS12: vitelline blood vessel Present 6E Expression in nascent vasculature and vitelline vessels.
TS12: primitive streak Absent 6E No expression in primitive streak-associated cells adjacent to hindgut invagination.
TS12: primitive hindgut Weak Regionally restricted 6E Faint colocalization with Mixl1 expression within ventral hindgut lip.
TS12: embryo mesoderm Weak Regionally restricted 6E Faint colocalization with Mixl1 expression within proximo-ventral mesoderm.

Specimen 6 somite stage not shown: embryonic day 8.0; Runx1tm2Spe/Runx1+ (more )
Note: 6 somite stage.
Structure Level Pattern Image Note
TS12: allantois Present Regionally restricted Co-expression with Mixl1 in ventral allantoic mesothelium.

Specimen 6F: embryonic day 8.0; Runx1tm2Spe/Runx1+ (more )
Note: 6 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS12: blood vessel Present 6F Expression in nascent vasculature and vitelline vessels.
TS12: vitelline blood vessel Present 6F Expression in nascent vasculature and vitelline vessels.
TS12: primitive streak Absent 6F No expression in primitive streak-associated cells adjacent to hindgut invagination.
TS12: primitive hindgut Weak Regionally restricted 6F Faint colocalization with Mixl1 expression within ventral hindgut lip.
TS12: embryo mesoderm Weak Regionally restricted 6F Faint colocalization with Mixl1 expression within proximo-ventral mesoderm.

Specimen 6G: embryonic day 8.0; Runx1tm2Spe/Runx1+ (more )
Note: 6 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS12: blood vessel Present 6G Expression in nascent vasculature and vitelline vessels.
TS12: vitelline blood vessel Present 6G Expression in nascent vasculature and vitelline vessels.
TS12: primitive streak Absent 6G No expression in primitive streak-associated cells adjacent to hindgut invagination.
TS12: primitive hindgut Weak Regionally restricted 6G Faint colocalization with Mixl1 expression within ventral hindgut lip.
TS12: embryo mesoderm Weak Regionally restricted 6G Faint colocalization with Mixl1 expression within proximo-ventral mesoderm.

Specimen 6H: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 10 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS13: extraembryonic endoderm Present Regionally restricted 6H Expression colocalizing with Mixl1 expression in extraembryonic visceral endoderm.
TS13: blood island Present Regionally restricted 6H Expression colocalizes with Mixl1 expression in presumptive erythroblasts.
TS13: vitelline artery Present Regionally restricted 6H Expression localized to developing blood cells of the omphalomesenteric artery.
TS13: chorion ectoderm Weak 6H Expression to a lesser extent within lateral chorionic ectoderm.

Specimen 6I: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 10 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS13: extraembryonic endoderm Present Regionally restricted 6I Expression colocalizing with Mixl1 expression in extraembryonic visceral endoderm.
TS13: yolk sac Present Regionally restricted 6I Within visceral yolk sac, co-localization with Mixl1 in both endothelium and blood cells.
TS13: blood island Present Regionally restricted 6I Expression colocalizes with Mixl1 expression in presumptive erythroblasts. Stronger expression in blood cells.

Specimen 6J: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 9 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS13: extraembryonic endoderm Present Regionally restricted 6J Cololcalization with Mixl1 expression within extraembryonic visceral endoderm.
TS13: chorion ectoderm Weak 6J Expression to a lesser extent within lateral chorionic ectoderm.

Specimen 6K: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 10 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS13: embryo Ambiguous 6K Authors state sections were treated with brief X-gal exposure. No expression patterns were reported.

Specimen 6L: embryonic day 8.5; Runx1tm2Spe/Runx1+ (more )
Note: 9 somite stage. Double labeled: blue - Runx1 reporter; brown - Mixl1 (assay MGI:6436901).
Structure Level Pattern Image Note
TS13: embryo Ambiguous 6L Authors state sections were treated with brief X-gal exposure. No expression patterns were reported.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory