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Gene Expression Data
Assay Details
Assay
Reference: J:188692 Dixit R, et al., Ascl1 participates in Cajal-Retzius cell development in the neocortex. Cereb Cortex. 2011 Nov;21(11):2599-611
Assay type: RNA in situ
MGI Accession ID: MGI:6404046
Gene symbol: Ascl1
Gene name: achaete-scute family bHLH transcription factor 1
Probe: Ascl1 probe3
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1C: embryonic day 10.5 (more )
Note: section at the level of the pallial septum (rostral)
Structure Level Pattern Image Note
TS17: telencephalon Present Non-Uniform 1C' , 1C Expression is present in neural progenitors, including lateral ganglionic eminence (stronger) and the pallial septum and ventral pallium (weaker).
Specimen 1D: embryonic day 10.5 (more )
Note: section at the level of the cortical hem (medial)
Structure Level Pattern Image Note
TS17: telencephalon Present Non-Uniform 1D , 1D'' , 1D' Expression is present in the neural progenitors, including those in the lateral ganglionic eminence (stronger) and the ventral pallium and the cortical hem (weaker).
Specimen 1E: embryonic day 11.5 (more )
Note: section at the level of the pallial septum (rostral)
Structure Level Pattern Image Note
TS19: telencephalon Present Non-Uniform 1E' , 1E Expression is present in the neural progenitors, including the lateral ganglionic eminence (stronger) and the pallial septum (weaker).
Specimen 1F: embryonic day 11.5 (more )
Note: section at the level of the cortical hem (medial)
Structure Level Pattern Image Note
TS19: telencephalon Present Non-Uniform 1F' , 1F , 1F'' Expression is present in neural progenitors, including in the ganglionic eminence (stronger) and the ventral pallium and cortical hem (weaker).
Specimen 1G: embryonic day 12.5 (more )
Note: section at the level of the pallial septum (rostral)
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present 1G Expression is present in neural progenitors.
TS20: cerebral cortex Present 1G' , 1G Expression is present in neural progenitors, including those in the pallium septum.
Specimen 1H: embryonic day 12.5 (more )
Note: section at the level of the cortical hem (medial)
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present 1H Expression is present in neural progenitors.
TS20: medial ganglionic eminence Present 1H Expression is present in neural progenitors.
TS20: cerebral cortex Present 1H , 1H' , 1H'' Expression is present in neural progenitors, including those in the ventral pallium and cortical hem.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory