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Gene Expression Data
Assay Details
Assay
Reference: J:121317 William DA, et al., Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model. Dev Biol. 2007 May 1;305(1):172-86
Assay type: RNA in situ
MGI Accession ID: MGI:6368788
Gene symbol: Nkd2
Gene name: naked cuticle 2
Probe: IMAGE clone 6314370
Probe preparation: labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen E8.5 not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: unsegmented mesenchyme Absent
Specimen 5A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present Regionally restricted 5A Expression in caudal presomitic mesoderm.
TS15: 1st branchial arch Weak Regionally restricted 5A Low level of expression in rostral region of first pharyngeal arch.
TS15: somite Weak 5A Low levels of expression in maturing somites.
Specimen 5B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present Regionally restricted 5B Expression in caudal presomitic mesoderm.
Specimen 5C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: 1st branchial arch Present Regionally restricted 5C Authors report similar expression at E10.5.
TS17: unsegmented mesenchyme Present Regionally restricted 5C Authors report similar expression at E10.5.
TS17: somite Strong 5C Higher levels of expression in somites.
Specimen 5D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: unsegmented mesenchyme Present Regionally restricted 5D Varying levels and extent of of expression in presomitic mesoderm.
Specimen 5E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: unsegmented mesenchyme Present Regionally restricted 5E Varying levels and extent of of expression in presomitic mesoderm.
Specimen 5F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: unsegmented mesenchyme Present Regionally restricted 5F Varying levels and extent of of expression in presomitic mesoderm.
Specimen 5G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: paraxial mesenchyme Present 5G
Specimen 5H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: tail mesenchyme Present 5H
Specimen 5I/J (right): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present Regionally restricted 5J Nkd2 , 5I Nkd2 Expression in broad region at caudal end of presomitic mesoderm.
Specimen 5K (right): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 5K Nkd2
Specimen 5L (right): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 5L Nkd2
Specimen 5M (right): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 5M Nkd2
Specimen 7C (left): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 7C (left)
Specimen S3A (left): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present S3A (left)
Specimen S3B (left): embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present S3B (left)
Specimen 8G: embryonic day 9.5; Dll3pu/Dll3pu (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 8G Authors report variation in levels, consistent with potential oscillatory expression.
Specimen 8H: embryonic day 9.5; Dll3pu/Dll3pu (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 8H Authors report variation in levels, consistent with potential oscillatory expression.
Specimen 8I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 8I
Specimen 8J: embryonic day 9.5; Wnt3atm1Amc/Wnt3atm1Amc (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Trace 8J Expression levels severely reduced.
Specimen 8J inset: embryonic day 9.5; Wnt3atm1Amc/Wnt3atm1Amc (more )
Structure Level Pattern Image Note
TS15: somite Present 8J inset
Specimen 8K: embryonic day 9.5; Wnt3atm1Amc/Wnt3atm1Amc (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Trace 8K Expression levels severely reduced.
Specimen 8L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: unsegmented mesenchyme Present 8L
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory