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Gene Expression Data
Assay Details
Assay
Reference: J:156170 Castillo HA, et al., Insights into the organization of dorsal spinal cord pathways from an evolutionarily conserved raldh2 intronic enhancer. Development. 2010 Feb;137(3):507-18
Assay type: RNA in situ
MGI Accession ID: MGI:6359733
Gene symbol: Aldh1a2
Gene name: aldehyde dehydrogenase family 1, subfamily A2
Probe: Raldh-2 probe1
Probe preparation: Antisense RNA
Results
Specimen 2E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present 2E
TS17: neural tube lateral wall Present Regionally restricted 2E Expression is in the dorsal interneurons in the posterior embryonic quarter.
Specimen 2G: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present 2G
TS17: neural tube lateral wall Present Regionally restricted 2G Expression is in motor neurons.
Specimen 3C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present 3C
Specimen 3D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present 3D
Specimen 3G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube roof plate Present 3G
Specimen 3H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube roof plate Present 3H
Specimen 6A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Strong 6A
TS17: neural tube lateral wall Present Regionally restricted 6A Expression is in interneurons in the lumbar spinal cord.
Specimen 6C: embryonic day 10.5 (more )
Note: Double labeled: blue - Aldh1a2; purple - Atoh1 (assay MGI:6359735).
Structure Level Pattern Image Note
TS17: neural tube roof plate Strong 6C
TS17: neural tube lateral wall Present Regionally restricted 6C Expression is in the dorsal interneurons at the hindlimb level.
Specimen 6E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Strong 6E
TS17: neural tube lateral wall Present Regionally restricted 6E Expression is in the dorsal interneurons in the lumbar spinal cord.
Specimen 6G: embryonic day 10.5 (more )
Note: Double labeled: blue - Aldh1a2; purple - Atoh1 (assay MGI:6359735).
Structure Level Pattern Image Note
TS17: neural tube roof plate Strong 6H , 6G
TS17: neural tube lateral wall Present Regionally restricted 6H , 6G Expression is in the dorsal interneurons in the lumbar spinal cord.
Specimen 7P: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube roof plate Present 7P
TS13: neural tube lateral wall Present Regionally restricted 7P Expression is in the dorsal interneurons.
Specimen 7Q: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube roof plate Present 7Q
TS14: neural tube lateral wall Present Regionally restricted 7Q Expression is in the dorsal interneurons.
Specimen 7R: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube roof plate Present 7R
TS14: neural tube lateral wall Present Regionally restricted 7R Expression is in the dorsal interneurons in the lumbar spinal cord.
Specimen S4D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube roof plate Present S4D
TS15: midbrain-hindbrain junction Absent S4D
Specimen S4E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present S4E
TS17: midbrain-hindbrain junction Absent S4E
Specimen S4F: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: midbrain-hindbrain junction Absent S4F
Specimen S4G: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present S4G
TS23: tectum Present S4G
Specimen S4H: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: cerebellum Present S4H , S4I
TS24: tectum Present S4H , S4I
Specimen S5A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present S5A Cervical spinal cord.
Specimen S5C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: neural tube roof plate Present S5C
TS17: neural tube lateral wall Present Regionally restricted S5C Expression is in the dorsal fifth of the lumbar spinal cord.
Specimen S5E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube roof plate Strong S5E
TS19: neural tube lateral wall Weak Regionally restricted S5E Expression is in the dorsal interneurons in the lumbar spinal cord.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory