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Gene Expression Data
Assay Details
Assay
Reference: J:264502 Ung DC, et al., Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse. Mol Psychiatry. 2018 May;23(5):1356-1367
Assay type: RT-PCR
MGI Accession ID: MGI:6358575
Gene symbol: Ptchd1
Gene name: patched domain containing 1
Probe: Ptchd1-pA, Ptchd1-pB
Assay notes: Assay was quantitative RT-PCR showing expression levels relative to Gapdh. In some cases, the curator has assigned strengths based on relative levels shown in the graph.
Results
Image: 1 ©

 Sample Information Bands Other Sample Information
Lane AgeStructure Size Not Specified (b) Amount Genetic BackgroundMutant Allele(s)Sex
E13 TELENCEPHALE E13.0 (a) TS21: telencephalon Weak Not Specified Not Specified Not Specified
E13 DIENCEPHALE E13.0 (a) TS21: diencephalon Weak Not Specified Not Specified Not Specified
E13 RHOMBENCEPHALE E13.0 (a) TS21: hindbrain Weak Not Specified Not Specified Not Specified
E13 SPINAL CORD E13.0 (a) TS21: spinal cord Weak Not Specified Not Specified Not Specified
E15 TELENCEPHALE E15.0 (a) TS23: telencephalon Weak Not Specified Not Specified Not Specified
E15 DIENCEPHALE E15.0 (a) TS23: diencephalon Weak Not Specified Not Specified Not Specified
E15 MIDBRAIN E15.0 (a) TS23: midbrain Strong Not Specified Not Specified Not Specified
E15 PONS E15.0 (a) TS23: pons Strong Not Specified Not Specified Not Specified
E15 MEDULLA E15.0 (a) TS23: medulla oblongata Strong Not Specified Not Specified Not Specified
E15 SPINAL CORD E15.0 (a) TS23: spinal cord Strong Not Specified Not Specified Not Specified
E18 FRONTAL CORTEX E18.0 (a) TS26: frontal cortex Present Not Specified Not Specified Not Specified
E18 POSTERIOR CORTEX E18.0 (a) TS26: cerebral cortex Present Not Specified Not Specified Not Specified
E18 ENTORHINAL CORTEX E18.0 (a) TS26: entorhinal cortex Present Not Specified Not Specified Not Specified
E18 OLFACTORY BULB E18.0 (a) TS26: main olfactory bulb Present Not Specified Not Specified Not Specified
E18 HIPPOCAMPUS E18.0 (a) TS26: hippocampus Present Not Specified Not Specified Not Specified
E18 STRIATUM E18.0 (a) TS26: corpus striatum Present Not Specified Not Specified Not Specified
E18 THALAMUS E18.0 (a) TS26: thalamus Strong Not Specified Not Specified Not Specified
E18 HYPOTHALAMUS E18.0 (a) TS26: hypothalamus Strong Not Specified Not Specified Not Specified
E18 MIDBRAIN E18.0 (a) TS26: midbrain Strong Not Specified Not Specified Not Specified
E18 PONS E18.0 (a) TS26: pons Strong Not Specified Not Specified Not Specified
E18 MEDULLA E18.0 (a) TS26: medulla oblongata Strong Not Specified Not Specified Not Specified
E18 SPINAL CORD E18.0 (a) TS26: spinal cord Strong Not Specified Not Specified Not Specified
P7 FRONTAL CORTEX P7 TS28: frontal cortex Present Not Specified Not Specified Not Specified
P7 POSTERIOR CORTEX P7 TS28: cerebral cortex Present Not Specified Not Specified Not Specified
P7 ENTORHINAL CORTEX P7 TS28: entorhinal cortex Present Not Specified Not Specified Not Specified
P7 OLFACTORY BULB P7 TS28: main olfactory bulb Present Not Specified Not Specified Not Specified
P7 HIPPOCAMPUS P7 TS28: hippocampus Present Not Specified Not Specified Not Specified
P7 STRIATUM P7 TS28: corpus striatum Present Not Specified Not Specified Not Specified
P7 THALAMUS P7 TS28: thalamus Present Not Specified Not Specified Not Specified
P7 HYPOTHALAMUS P7 TS28: hypothalamus Present Not Specified Not Specified Not Specified
P7 CEREBELLUM P7 TS28: cerebellum Present Not Specified Not Specified Not Specified
P7 MIDBRAIN P7 TS28: midbrain Present Not Specified Not Specified Not Specified
P7 PONS P7 TS28: pons Present Not Specified Not Specified Not Specified
P7 MEDULLA P7 TS28: medulla oblongata Present Not Specified Not Specified Not Specified
P7 SPINAL CORD P7 TS28: spinal cord Present Not Specified Not Specified Not Specified
P35 FRONTAL CORTEX P35 TS28: frontal cortex Weak Not Specified Not Specified Not Specified
P35 POSTERIOR CORTEX P35 TS28: cerebral cortex Weak Not Specified Not Specified Not Specified
P35 ENTORHINAL CORTEX P35 TS28: entorhinal cortex Weak Not Specified Not Specified Not Specified
P35 OLFACTORY BULB P35 TS28: main olfactory bulb Weak Not Specified Not Specified Not Specified
P35 HIPPOCAMPUS P35 TS28: hippocampus Weak Not Specified Not Specified Not Specified
P35 STRIATUM P35 TS28: corpus striatum Weak Not Specified Not Specified Not Specified
P35 THALAMUS P35 TS28: thalamus Weak Not Specified Not Specified Not Specified
P35 HYPOTHALAMUS P35 TS28: hypothalamus Strong (c) Not Specified Not Specified Not Specified
P35 CEREBELLUM P35 TS28: cerebellum Strong (c) Not Specified Not Specified Not Specified
P35 MIDBRAIN P35 TS28: midbrain Weak Not Specified Not Specified Not Specified
P35 PONS P35 TS28: pons Weak Not Specified Not Specified Not Specified
P35 MEDULLA P35 TS28: medulla oblongata Weak Not Specified Not Specified Not Specified
P35 SPINAL CORD P35 TS28: spinal cord Weak Not Specified Not Specified Not Specified
Notes:
(a) Age of embryo at noon of plug day not specified in reference.
(b) Strongest expression at E18-P7 in most brain regions.
(c) Expression decreases in adult stages, except in cerebellar and hypothalamic regions.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory