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Gene Expression Data
Assay Details
Assay
Reference: J:149237 Perez-Balaguer A, et al., Shh dependent and independent maintenance of basal midbrain. Mech Dev. 2009 May-Jun;126(5-6):301-13
Assay type: Immunohistochemistry
MGI Accession ID: MGI:6304459
Gene symbol: Nkx6-1
Gene name: NK6 homeobox 1
Results
Specimen 6C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: midbrain ventricular layer Present Regionally restricted 6C Two immunopositive domains were noted in the ventricular region.
TS17: midbrain mantle layer Present Regionally restricted 6C Some early born motorneurons of the oculomotor complex were found in the mantle layer.

Specimen 6F: embryonic day 10.5; Shhtm2Amc/Shhtm2Amc, En1tm2(cre)Wrst/En1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS17: midbrain ventricular layer Present Regionally restricted 6F The two immunopositive domains in the ventricular region were detected in the conditional mutant, but they were less obvious than in wild type.
TS17: midbrain mantle layer Present Regionally restricted 6F Some immunopositive cells were detected.

Specimen 6I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain ventricular layer Present Regionally restricted 6I Two immunopositive domains were noted in the ventricular region.

Specimen 6L: embryonic day 12.5; Shhtm2Amc/Shhtm2Amc, En1tm2(cre)Wrst/En1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS20: midbrain ventricular layer Present Regionally restricted 6L At E12.5, the dorsal ventricular expression domain was absent, but the ventral domain was maintained.
TS20: midbrain mantle layer Absent 6L

Specimen 7G: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 7G Expression was detected in a ventral expression domain.

Specimen 7J: embryonic day 12.5; Shhtm2Amc/Shhtm2Amc, En1tm2(cre)Wrst/En1+ (more )
Note: Conditional mutant.
Structure Level Pattern Image Note
TS20: midbrain Present Regionally restricted 7J Expression was detected in the ventral domain.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory