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Gene Expression Data
Assay Details
Assay
Reference: J:44409 Gofflot F, et al., Genetic patterning of the developing mouse tail at the time of posterior neuropore closure. Dev Dyn. 1997 Dec;210(4):431-45
Assay type: RNA in situ
MGI Accession ID: MGI:6226147
Gene symbol: Hoxb1
Gene name: homeobox B1
Probe: Hoxb1 probe23
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2I: embryonic day 10.5 (more )
Note: 28-30 somite stage.
Structure Level Pattern Image Note
TS17: neural tube Present Regionally restricted 2I Expression was mainly in the dorsal neural tube.
TS17: tail Strong 2I
TS17: tail mesenchyme Present Regionally restricted 2I Expression was detected in primary mesenchyme. The cranial border of the expression domain was located at the ventral curvature.
Specimen 3a: embryonic day 10.5 (more )
Note: Fig. 3 sections are presented in a caudal to cranial sequence (a-e).
Structure Level Pattern Image Note
TS17: tail mesenchyme Present 3_Hoxb1 a
Specimen 3b: embryonic day 10.5 (more )
Note: Fig. 3 sections are presented in a caudal to cranial sequence (a-e).
Structure Level Pattern Image Note
TS17: notochord Present 3_Hoxb1 b
TS17: tail mesenchyme Present 3_Hoxb1 b
TS17: hindgut Absent 3_Hoxb1 b
TS17: tail surface ectoderm Absent 3_Hoxb1 b
Specimen 3c: embryonic day 10.5 (more )
Note: Fig. 3 sections are presented in a caudal to cranial sequence (a-e).
Structure Level Pattern Image Note
TS17: tail mesenchyme Present 3_Hoxb1 c
TS17: hindgut Absent 3_Hoxb1 c
TS17: tail surface ectoderm Absent 3_Hoxb1 c
Specimen 3d: embryonic day 10.5 (more )
Note: Fig. 3 sections are presented in a caudal to cranial sequence (a-e).
Structure Level Pattern Image Note
TS17: tail mesenchyme Present Regionally restricted 3_Hoxb1 d There was a ventral to dorsal restriction of the expression domain in progressively cranial sections.
TS17: tail somite Present Regionally restricted 3_Hoxb1 d Expression was detected in the condensing somites.
TS17: tail dermomyotome Present 3_Hoxb1 d
TS17: hindgut Absent 3_Hoxb1 d
TS17: tail surface ectoderm Absent 3_Hoxb1 d
Specimen 3e: embryonic day 10.5 (more )
Note: Fig. 3 sections are presented in a caudal to cranial sequence (a-e).
Structure Level Pattern Image Note
TS17: tail mesenchyme Present Regionally restricted 3_Hoxb1 e There was a ventral to dorsal restriction of the expression domain in progressively cranial sections.
TS17: tail somite Ambiguous Regionally restricted 3_Hoxb1 e Expression was downregulated in complete somites.
TS17: neural tube Present Regionally restricted 3_Hoxb1 e Expression in the apical neuroepithelium was restricted to the dorsal half of the tube in the most cranial sections.
TS17: hindgut Absent 3_Hoxb1 e
TS17: tail surface ectoderm Absent 3_Hoxb1 e
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory