Gene Expression Data
Assay Details
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Assay
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Reference:
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J:64982
Nacke S, et al., Mouse mutant 'rib-vertebrae' (rv): A defect in somite polarity. Dev Dyn. 2000 Oct;219(2):192-200
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:6154641
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Gene symbol:
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Pax1
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Gene name:
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paired box 1
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Results
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Specimen
3A +/+ top:
embryonic day 9.5
(more  )
Specimen
3A +/+ top:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
3A rv/rv top:
embryonic day 9.5; Tbx6rv/ Tbx6rv
(more )
Specimen
3A rv/rv top:
(close )
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Genetic Background:
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involves: C57L/J * C57BL/6J * CAST/Ei
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Mutant Allele(s):
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Tbx6rv/Tbx6rv
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: somite |
Present |
Diffuse |
3A rv/rv top
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The periodic pattern of expression was lost in the mutant. The intensity of expression was variable; some somites showed strong expression whereas others were almost absent.
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| TS15: branchial arch |
Present |
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3A rv/rv top
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Expression in the branchial arches was not affected.
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Specimen
3A +/+ middle:
embryonic day 9.5
(more )
Specimen
3A +/+ middle:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: sclerotome |
Present |
Non-Uniform |
3A +/+ middle
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Expression was detected in the sclerotome with a stronger posterior and a weaker anterior domain.
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Specimen
3A rv/rv middle:
embryonic day 9.5; Tbx6rv/ Tbx6rv
(more )
Specimen
3A rv/rv middle:
(close )
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Genetic Background:
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involves: C57L/J * C57BL/6J * CAST/Ei
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Mutant Allele(s):
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Tbx6rv/Tbx6rv
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: somite |
Present |
Diffuse |
3A rv/rv middle
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The periodic pattern of expression was lost in the mutant. The intensity of expression was variable; some somites showed strong expression whereas others were almost absent.
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Specimen
3A +/+ bottom:
embryonic day 9.5
(more )
Specimen
3A +/+ bottom:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: sclerotome |
Present |
Non-Uniform |
3A +/+ bottom
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Expression was detected in the sclerotome with a stronger posterior and a weaker anterior domain.
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Specimen
3A rv/rv bottom:
embryonic day 9.5; Tbx6rv/ Tbx6rv
(more )
Specimen
3A rv/rv bottom:
(close )
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Genetic Background:
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involves: C57L/J * C57BL/6J * CAST/Ei
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Mutant Allele(s):
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Tbx6rv/Tbx6rv
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Embedding:
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Gelatin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: somite |
Present |
Diffuse |
3A rv/rv bottom
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The periodic pattern of expression was lost in the mutant. The intensity of expression was variable; some somites showed strong expression whereas others were almost absent.
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Analysis Tools