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Gene Expression Data
Assay Details
Assay
Reference: J:87370 Chen JC, et al., The core enhancer is essential for proper timing of MyoD activation in limb buds and branchial arches. Dev Biol. 2004 Jan 15;265(2):502-12
Assay type: RNA in situ
MGI Accession ID: MGI:6116219
Gene symbol: Myod1
Gene name: myogenic differentiation 1
Probe: Myod cDNA4
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 3A: embryonic day 9.75 (more )
Structure Level Pattern Image Note
TS16: 1st branchial arch Present 3A , 3A inset Expression first detected in branchial arches at approximately E9.75.
TS16: somite Present 3A Expression first detected in interlimb somites at E9.5-E9.75, initiated in a cranio-caudal fashion, occuring slightly later in occipito-cervical somites. Weak expression in somites anterior to forelimb bud.

Specimen 3B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: head mesenchyme Present Regionally restricted 3B Expression in developing facial musculature (e.g. extraocular muscle precursors).
TS17: 1st branchial arch Present 3B
TS17: forelimb bud Present 3B Expression first detected in limb buds at E10.5
TS17: hindlimb bud Present 3B Expression first detected in limb buds at E10.5
TS17: somite Present 3B

Specimen 3C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: face Present Regionally restricted 3C Expression in musculature of face.
TS19: branchial arch Present 3C
TS19: forelimb bud Present 3C
TS19: hindlimb bud Present 3C
TS19: somite Present 3C

Specimen 3D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: myotome Present Regionally restricted 3D Expression in myotomal muscle.

Specimen 3E: embryonic day 9.75; Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS16: 1st branchial arch Absent 3E inset , 3E Authors report expression eessentially eliminated in mandibular arch.
TS16: somite Present 3E Authors report a small reduction in expression in mutants, in a comparable number of somites to that of wild type. Weak expression in somites anterior to forelimb bud.

Specimen 3F: embryonic day 10.5; Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS17: head mesenchyme Ambiguous 3F Expression dramatically lower than wild type in developing facial musculature (e.g. extraocular muscle precursors).
TS17: 1st branchial arch Trace 3F Expression barely detectable in mandibular arch. Authors report overstaining revealed traces of transcripts.
TS17: forelimb bud Weak Regionally restricted 3F Authors report expression in limb buds was delayed in mutant embryos. Pronounced decrease in expression in muscle precursors of forelimb bud.
TS17: hindlimb bud Ambiguous 3F
TS17: somite Present 3F Authors report a small reduction in expression in mutant embryos, with patterning resembling wild-type.
TS17: myotome Present Regionally restricted 3F Authors report no specific defect in expression in muscle precursors subjacent to dermomyotomal lips or in young myocytes of epaxial and hypaxial myotome.

Specimen 3G: embryonic day 11.5; Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS19: face Present Regionally restricted 3G Expression in musculature of face remained lower in mutants embryos.
TS19: branchial arch Present 3G Authors report expression largely recovered in brahcnial arches and forelimb buds.
TS19: forelimb bud Present 3G Authors report expression largely recovered in brahcnial arches and forelimb buds.
TS19: hindlimb bud Weak 3G Expression remained significantly lower in mutant than in wild-type embryos.v
TS19: somite Present 3G Authors report a small reduction in expression in mutant embryos, with patterning resembling wild-type.
TS19: myotome Present Regionally restricted 3G Authors report no specific defect in expression in muscle precursors subjacent to dermomyotomal lips or in young myocytes of epaxial and hypaxial myotome.

Specimen 3H: embryonic day 12.5; Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS20: myotome Present Regionally restricted 3H Authors report no difference in expression levels in myotomal muscle populations between wild-type and mutant embryos.

Specimen E10.5 CE+/loxP:Myf5-/- not shown: embryonic day 10.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1+ (more )
Structure Level Pattern Image Note
TS17: myotome Ambiguous Authors report expression in myotomes was delayed.

Specimen E10.5 CEloxP/loxP:Myf5-/- not shown: embryonic day 10.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS17: myotome Ambiguous Authors report expression in myotomes was delayed.

Specimen 6A: embryonic day 11.5; Myf5tm1Jae/Myf5+, Myod1tm1.1Glh/Myod1+ (more )
Structure Level Pattern Image Note
TS19: myotome Present Regionally restricted 6A Authors report normal expression throughout mediolateral extent of myotome.v
TS19: branchial arch Present 6A Authors state expression was not affected by the Myf5 mutation.
TS19: limb bud Present 6A Authors state expression was not affected by the Myf5 mutation.

Specimen 6B: embryonic day 11.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1+ (more )
Structure Level Pattern Image Note
TS19: myotome Weak Regionally restricted 6B Weak expression in ventrolateral myotomes of interlimb somites.
TS19: branchial arch Present 6B Authors state expression was not affected by the Myf5 mutation.
TS19: limb bud Present 6B Authors state expression was not affected by the Myf5 mutation.

Specimen 6C: embryonic day 11.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS19: myotome Weak Regionally restricted 6C Weak expression in ventrolateral myotomes of interlimb somites.
TS19: branchial arch Present 6C Authors state expression was not affected by the Myf5 mutation.
TS19: limb bud Present 6C Authors state expression was not affected by the Myf5 mutation.

Specimen 6D: embryonic day 12.5; Myf5tm1Jae/Myf5+, Myod1tm1.1Glh/Myod1+ (more )
Structure Level Pattern Image Note
TS20: myotome Present 6D

Specimen 6E: embryonic day 12.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1+ (more )
Structure Level Pattern Image Note
TS20: myotome Present 6E Normal expression levels in myotomal muscles.
TS20: trunk musculature Present Regionally restricted 6E Authors report disorganization of trunk musculature as the result of rib defects.

Specimen 6F: embryonic day 12.5; Myf5tm1Jae/Myf5tm1Jae, Myod1tm1.1Glh/Myod1tm1.1Glh (more )
Structure Level Pattern Image Note
TS20: myotome Present 6F Normal expression levels in myotomal muscles.
TS20: trunk musculature Present Regionally restricted 6F Authors report disorganization of trunk musculature as the result of rib defects.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory