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Gene Expression Data
Assay Details
Assay
Reference: J:37519 Jen Y, et al., Each member of the Id gene family exhibits a unique expression pattern in mouse gastrulation and neurogenesis. Dev Dyn. 1997 Jan;208(1):92-106
Assay type: RNA in situ
MGI Accession ID: MGI:5927649
Gene symbol: Id1
Gene name: inhibitor of DNA binding 1, HLH protein
Probe: Id1 cDNA
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1 E5.5: embryonic day 5.5 (more )
Structure Level Pattern Image Note
TS7: ectoderm Present Regionally restricted 1_E5.5 left Expressed in the proximal side of the embryonic ectoderm juxtaposed to the extraembryonic ectoderm.
TS7: extraembryonic visceral endoderm Present 1_E5.5 left
TS7: extraembryonic ectoderm Absent 1_E5.5 left

Specimen 1 E6.5: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo ectoderm Present 1_E6.5 upper left Same as that observed at E5.5.
TS9: extraembryonic visceral endoderm Present 1_E6.5 upper left Same as that observed at E5.5.
TS9: extraembryonic ectoderm Absent 1_E6.5 upper left

Specimen 2A/B: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: allantois Present 2A/B
TS11: chorion Present 2A/B
TS11: yolk sac endoderm Present Regionally restricted 2A/B Expressed in the cell layer in the visceral yolk sac which is derived from the proximal endoderm.
TS11: embryo ectoderm Present Regionally restricted 2A/B Expressed in the proximal portion.
TS11: embryo endoderm Present Regionally restricted 2A/B Expressed in the proximal portion.
TS11: embryo mesoderm Present Regionally restricted 2A/B Expressed in the proximal portion.

Specimen 3A/E: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube roof plate Strong 3A/E
TS19: neural tube ventricular layer Present Regionally restricted 3A/E Weaker expression throughout the rest of the ventricular zone except in the dorsal one-third.
TS19: neural tube floor plate Absent 3A/E

Specimen 3B/F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: midbrain Present 3B/F
TS19: diencephalon Present 3B/F Expression is much weaker and more restricted.
TS19: telencephalon Present Regionally restricted 3B/F Expressed in the medial side of the telencephalic vesicles, located laterally to the third ventricle.

Specimen 3C/G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: hindbrain Present 3C/G

Specimen 3D/H: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: myelencephalon Present 3D/H

Specimen 4A/B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: diencephalon Present 4A/B
TS20: midbrain Present 4A/B
TS20: telencephalon Present Regionally restricted 4A/B Expressed in the medial side of the telencephalic vesicles, located laterally to the third ventricle.

Specimen 4F/G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: midbrain ventricular layer Present 4F/G

Specimen 4K/L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: telencephalon ventricular layer Present 4K/L
TS22: choroid plexus Present 4K/L

Specimen 4P/Q: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: brain ventricular layer Present 4P/Q

Specimen 6E/F: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: otocyst epithelium Present 6E/F
TS19: otocyst Present 6E/F Expressed in both the epithelium of the otic vesicle and its surrounding mesenchyme.

Specimen 7A/B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present 7A/B
TS22: pigmented retinal epithelium Absent 7A/B
TS22: lens Present Scattered 7A/B

Specimen 7F/G: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: nasal pit epithelium Present Non-Uniform 7F/G
TS19: nasal process Present Regionally restricted 7F/G Expressed in the area surrounding the nasal placode.

Specimen 7K/L: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present Regionally restricted 7K/L Expressed in the presumptive olfactory neuronal progenitors located next to the mesenchyme.
TS22: nasal mesenchyme Present Regionally restricted 7K/L Expressed in the supporting cell layer, which is located adjacent to the lumen of the nasal cavity.

Specimen not shown: embryonic day 4.5 (more )
Structure Level Pattern Image Note
TS6: embryo Absent
TS6: extraembryonic component Absent

Specimen not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural fold Present

Specimen not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present
TS15: optic vesicle Present

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: optic cup inner layer Present
TS17: trigeminal ganglion Present
TS17: lens vesicle Present Scattered
TS17: optic cup outer layer Absent
TS17: olfactory placode Present Expression is not uniform throughout the placodal epithelium.
TS17: nasal process Present Regionally restricted Expressed in the area surrounding the nasal placode.

Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: Rathke's pouch Present
TS19: infundibular recess of 3rd ventricle Present

Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Present
TS20: lens vesicle Present Scattered
TS20: pigmented retinal epithelium Absent

Specimen not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: neural retina Present
TS24: lens Present Scattered
TS24: pigmented retinal epithelium Absent

Specimen not shown: postnatal (more )
Note: maternal decidua during gastrulation
Structure Level Pattern Image Note
TS28: decidua Present Regionally restricted Expressed in the fibroblastic stromal cells prior to their decidulation.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory