Gene Expression Data
Assay Details
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Assay
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Reference:
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J:16244
Ang SL, et al., The formation and maintenance of the definitive endoderm lineage in the mouse: involvement of HNF3/forkhead proteins. Development. 1993 Dec;119(4):1301-15
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5825135
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Gene symbol:
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Foxb1
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Gene name:
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forkhead box B1
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Probe:
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HFH-E5.1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
7A left:
embryonic day 7.0
(more  )
Note: Mid- to late streak embryo.
Specimen
7A left:
(close  )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Mid- to late streak embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
7A left
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Expression was detected in the distal portion of the embryo posteriorly.
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Specimen
7A right:
embryonic day 7.0
(more )
Note: Mid- to late streak embryo.
Specimen
7A right:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Mid- to late streak embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
7A right
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Expression was detected in the distal portion of the embryo posteriorly.
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Specimen
not shown:
embryonic day 7.0
(more )
Note: Mid- to late streak embryo.
Specimen
not shown:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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optical section
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Note:
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Mid- to late streak embryo.
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Specimen
7B left:
embryonic day 7.5
(more )
Note: Early headfold embryo.
Specimen
7B left:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Early headfold embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: embryo mesoderm |
Strong |
Regionally restricted |
7B left
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A band of strong staining was noted in anterior mesoderm. Posterior to the node, strong expression was detected in mesoderm.
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| TS11: embryo ectoderm |
Strong |
Regionally restricted |
7B left
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Posterior to the node, strong expression was detected in ectoderm.
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| TS11: neural plate |
Strong |
Regionally restricted |
7B left
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Posterior to the node, strong expression was detected in ectoderm.
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Specimen
7B right:
embryonic day 7.5
(more )
Note: Late headfold embryo.
Specimen
7B right:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Late headfold embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: embryo mesoderm |
Strong |
Regionally restricted |
7B right
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A band of strong staining was noted in anterior mesoderm. Posterior to the node, strong expression was detected in mesoderm.
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| TS11: embryo ectoderm |
Strong |
Regionally restricted |
7B right
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Posterior to the node, strong expression was detected in ectoderm.
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| TS11: neural plate |
Strong |
Regionally restricted |
7B right
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Posterior to the node, strong expression was detected in ectoderm.
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Specimen
7C:
embryonic day 7.5
(more )
Note: Late headfold embryo.
Specimen
7C:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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Late headfold embryo.
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Specimen
7D:
embryonic day 8.5
(more )
Note: 9-10 somite embryo.
Specimen
7D:
(close )
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Genetic Background:
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CD-1
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Age:
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embryonic day 8.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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9-10 somite embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural tube |
Present |
Widespread |
7D
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The entire neural tube from midbrain to the posterior end showed positive staining.
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| TS13: trunk unsegmented mesenchyme |
Present |
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7D
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Expression was detected in presomitic mesoderm.
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| TS13: somite |
Weak |
Regionally restricted |
7D
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Weak expression was observed in medial stripes of the anterior somites.
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Analysis Tools