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Gene Expression Data
Assay Details
Assay
Reference: J:210446 Tekko T, et al., Initiation and developmental dynamics of Wfs1 expression in the context of neural differentiation and ER stress in mouse forebrain. Int J Dev Neurosci. 2014 Jun;35:80-8
Assay type: RNA in situ
MGI Accession ID: MGI:5704212
Gene symbol: Syp
Gene name: synaptophysin
Probe: Syp cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Strong Regionally restricted 1A Expression is strong in the dorsal striatum, weak in the ventral part.
TS23: caudate-putamen Present Regionally restricted 1A Expression is in the anterior and medial parts of the caudate putamen.
TS23: cerebral cortex Present Regionally restricted 1A Expression is in the allocortex.
TS23: cortical plate Present Diffuse 1A
TS23: telencephalon septum Present Regionally restricted 1A expression is in the lateral and medium septum.

Specimen 1B: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Strong Regionally restricted 1B Expression is in the dorsal striatum.
TS23: caudate-putamen Present Regionally restricted 1B Expression is in the anterior and medial parts of the caudate putamen.
TS23: cerebral cortex Present Regionally restricted 1B Expression is in the allocortex.
TS23: hippocampus Present Regionally restricted 1B Expression is in the cornu ammonis and subiculum regions.
TS23: cortical plate Present Diffuse 1B
TS23: thalamus Present Regionally restricted 1B Expression is in the lateral part.
TS23: hypothalamus Present Regionally restricted 1B Expression is in the paraventricular hypothalamic nucleus.

Specimen 1C: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: amygdala Strong Regionally restricted 1C Expression is in the central amygdaloid nucleus, weaker in the medial, cortical, and basomedial nucleus.
TS23: cerebral cortex Present Regionally restricted 1C
TS23: hippocampus Present Regionally restricted 1C Expression is in the cornu ammonis and subiculum regions.
TS23: cortical plate Present Diffuse 1C
TS23: thalamus Present Regionally restricted 1C Expression is in the lateral part.
TS23: hypothalamus Present Regionally restricted 1C Expression is in the paraventricular hypothalamic nucleus.

Specimen 1D: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: hippocampus Present Regionally restricted 1D Expression is in the cornu ammonis and subiculum regions.

Specimen 3A: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Present Regionally restricted 3A Expression is in the lateral part.
TS23: hypothalamus Present Regionally restricted 3A Expression is in the paraventricular hypothalamic nucleus.
TS23: diencephalon Present 3A
TS23: brain Weak 3A

Specimen 3B: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon Present 3B
TS23: brain Weak 3B

Specimen 3C: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: diencephalon Present 3C
TS25: dentate gyrus Weak Regionally restricted 3C Expression is in the upper blade.

Specimen 3D: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: diencephalon Present 3D
TS25: dentate gyrus Weak Regionally restricted 3D Expression is in the upper blade.

Specimen 3E: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: diencephalon Strong 3E
TS27: caudate-putamen Weak Regionally restricted 3E Expression is in the medial part of the caudate putamen.

Specimen 3F: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: diencephalon Strong 3F

Specimen 3G: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: diencephalon Strong 3G
TS28: caudate-putamen Weak Regionally restricted 3G Expression is in the medial part of the caudate putamen.

Specimen 3H: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: diencephalon Strong 3H

Specimen 4B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cortical plate Weak Diffuse 4B

Specimen 4D: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cortical layer V Present 4D

Specimen 4F: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: neocortex layer Present 4F

Specimen 4H: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: neocortex layer Present 4H

Specimen 4J: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: neocortex layer Present 4J

Specimen 4L: postnatal day 20 (more )
Structure Level Pattern Image Note
TS28: neocortex layer Present 4L

Specimen 4N: postnatal day 20 (more )
Structure Level Pattern Image Note
TS28: neocortex layer Present 4N

Specimen not shown E17.5: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hypothalamus Present Regionally restricted Expression is in various nuclei in the dorsal and ventral thalamus.

Specimen not shown: postnatal adult (more )
Structure Level Pattern Image Note
TS28: caudate-putamen Absent

Specimen not shown P2: postnatal day 2 (more )
Structure Level Pattern Image Note
TS27: dentate gyrus Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/30/2025
MGI 6.24
The Jackson Laboratory