Gene Expression Data
Assay Details
Assay
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Reference:
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J:18563
Qiu Y, et al., Spatiotemporal expression patterns of chicken ovalbumin upstream promoter-transcription factors in the developing mouse central nervous system: evidence for a role in segmental patterning of the diencephalon. Proc Natl Acad Sci U S A. 1994 May 10;91(10):4451-5
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5609168
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Gene symbol:
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Nr2f2
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Gene name:
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nuclear receptor subfamily 2, group F, member 2
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Probe:
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Aporp1 cDNA2
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
E7.5 not shown:
embryonic day 7.5
(more )
Specimen
E7.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 7.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
E8.5 not shown:
embryonic day 8.5
(more )
Specimen
E8.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo |
Present |
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Authors report expression first observed around 8.5 days p.c., peaking at 14-15 days p.c., and declining before birth.
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Specimen
E10.5 not shown:
embryonic day 10.5
(more )
Specimen
E10.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
2B:
embryonic day 10.5
(more )
Specimen
2B:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS17: brain ventricular layer |
Present |
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2B
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TS17: hindbrain |
Present |
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2B
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Authors report expression is similar to that seen for mCOUP-TFI.
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TS17: optic stalk |
Present |
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2B
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Authors report expression is similar to that seen for mCOUP-TFI.
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TS17: telencephalon |
Present |
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2B
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Authors report expression is similar to that seen for mCOUP-TFI.
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TS17: diencephalon |
Present |
Regionally restricted |
2B
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Slightly lower expression in the future D2 (dorsal thalamus) region of the diencephalon as compared to mCOUP-TFI.
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TS17: midbrain |
Present |
Regionally restricted |
2B
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Expression restricted to rostral third of tectum.
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Specimen
2D:
embryonic day 11.5
(more )
Specimen
2D:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS19: optic stalk |
Present |
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2D
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TS19: telencephalon |
Present |
Regionally restricted |
2D
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Expression in dorsocaudal portion of telencephalon.
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TS19: diencephalon |
Present |
Regionally restricted |
2D
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Higher expression in D1 (ventral thalamus and hypothalamus) and D2 (dorsal thalamus). Authors report expression is weaker in D2 than that of mCOUP-TFI.
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TS19: midbrain |
Present |
Regionally restricted |
2D
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Medial domain was restricted to future midbrain. Rostrally restricted expression domains in the midbrain. Expression restricted to rostral third of tectum.
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TS19: hindbrain |
Present |
Regionally restricted |
2D
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Caudal domain started in middle of rhombomere 1 and extended caudally.
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Specimen
2F:
embryonic day 14.5
(more )
Specimen
2F:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS22: forebrain |
Present |
Regionally restricted |
2F
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Expression was more caudally restricted. No expression in the pallium.
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TS22: ganglionic eminence |
Strong |
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2F
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TS22: lateral ganglionic eminence |
Absent |
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2F
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TS22: diencephalon |
Present |
Regionally restricted |
2F
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Expression extends from D1 (ventral thalamus and hypothalamus) anteriorly. Low levels in D3/D4 (pretectal) regions and zona limitans intrathalamica.
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TS22: thalamus |
Strong |
Regionally restricted |
2F
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High expression in D1 (ventral thalamus and hypothalamus). Expression undetectable in D2 (dorsal thalamus).
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TS22: hypothalamus |
Strong |
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2F
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High expression in D1 (ventral thalamus and hypothalamus). Expression undetectable in D2 (dorsal thalamus).
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TS22: pretectum |
Weak |
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2F
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Expression slightly above background in the D3/D4 region.
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TS22: midbrain |
Present |
Regionally restricted |
2F
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Expression in rostral part of tectum.
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TS22: midbrain tegmentum |
Strong |
Regionally restricted |
2F
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High expression in oculomotor nucleus.
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Specimen
E16.5 midbrain not shown:
embryonic day 16.5
(more )
Specimen
E16.5 midbrain not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS24: midbrain |
Present |
Regionally restricted |
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From 16.5 days p.c. onward, expression domains narrowed rostrally.
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TS24: midbrain tegmentum |
Strong |
Regionally restricted |
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Strong expression in the oculomotor nuclues in the tegmentum from 11.5 to 16.5 days p.c..
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Specimen
2H:
embryonic day 18.5
(more )
Specimen
2H:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS26: brain |
Weak |
Regionally restricted |
2H
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Authors report expression is much lower than at previous stages.
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TS26: telencephalon |
Trace |
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2H
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Minimal expression in the telencephalon.
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TS26: diencephalon |
Present |
Regionally restricted |
2H
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Expression in D1 (ventral thalamus and hypothalamus), D3 and D4 (pretectal) regions, zona limitans intrathalamica and rostral midbrain.
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TS26: midbrain |
Present |
Regionally restricted |
2H
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Expression in D1 (ventral thalamus and hypothalamus), D3 and D4 (pretectal) regions, zona limitans intrathalamica and rostral midbrain.
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TS26: pretectum |
Present |
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2H
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TS26: thalamus |
Present |
Regionally restricted |
2H
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Expression extends from D1 anteriorly. Low expression in D2.
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TS26: tectum |
Present |
Regionally restricted |
2H
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Expression restricted to an anterior strip of the tectum.
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Specimen
3B:
embryonic day 11.5
(more )
Specimen
3B:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: hindbrain |
Strong |
Regionally restricted |
3B
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High levels of expression in a portion of the hindbrain neurothelium just lateral to the floor plate. Background level of expression in the rest of the hindbrain neurothelium.
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Specimen
3D:
embryonic day 14.5
(more )
Specimen
3D:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS22: spinal cord |
Present |
Regionally restricted |
3D
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Expression in spinal cord motor neurons of the ventral horn from 10.5 days. p.c. onwards. Expression in substantia gelatinosa in the dorsal horn at the cervical level between 14.5 and 18.5 days p.c..
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Specimen
E16.5 spinal cord not shown:
embryonic day 16.5
(more )
Specimen
E16.5 spinal cord not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS24: spinal cord |
Present |
Regionally restricted |
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Expression disappeared from somatic motor neurons at 16 days p.c. Authors state that expression persisted longer in the lateral horn.
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Specimen
3F:
embryonic day 18.5
(more )
Specimen
3F:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS26: dorsal grey horn |
Present |
Regionally restricted |
3F
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Expression in substantia gelatinosa in the dorsal horn at the cervical level between 14.5 and 18.5 days p.c..
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