Gene Expression Data
Assay Details
Assay
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Reference:
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J:18563
Qiu Y, et al., Spatiotemporal expression patterns of chicken ovalbumin upstream promoter-transcription factors in the developing mouse central nervous system: evidence for a role in segmental patterning of the diencephalon. Proc Natl Acad Sci U S A. 1994 May 10;91(10):4451-5
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5609167
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Gene symbol:
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Nr2f1
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Gene name:
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nuclear receptor subfamily 2, group F, member 1
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Probe:
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Erbal3 cDNA2
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
E7.5 not shown:
embryonic day 7.5
(more )
Specimen
E7.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 7.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
E8.5 not shown:
embryonic day 8.5
(more )
Specimen
E8.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo |
Present |
|
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Expression first observed around 8.5 days p.c., peaking at 14-15 days p.c., and declining before birth.
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Specimen
E10.5 not shown:
embryonic day 10.5
(more )
Specimen
E10.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
2A:
embryonic day 10.5
(more )
Specimen
2A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
2C:
embryonic day 11.5
(more )
Specimen
2C:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS19: optic stalk |
Present |
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2C
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TS19: telencephalon |
Present |
Regionally restricted |
2C
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Expression in dorsocaudal portion of telencephalon,
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TS19: diencephalon |
Present |
Regionally restricted |
2C
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Anterior expression domain extends caudally into diencephalon, with segmentally restricted expression in diencephalic neuromeres. Similar high levels of expression in both D1 (ventral thalamus and hypothalamus) and D2 (dorsal thalamus) regions.
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TS19: midbrain |
Present |
Regionally restricted |
2C
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Medial expression domain restricted to the midbrain. Anterior-posterior gradient of expression in tectum, highest at the rostral end.
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TS19: hindbrain |
Present |
Regionally restricted |
2C
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Caudal domain started in rhombomere 1 and extended caudally.
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Specimen
E13.5 not shown:
embryonic day 13.5
(more )
Specimen
E13.5 not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 13.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS21: telencephalon |
Present |
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Expression in most of the pallium.
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Specimen
2E:
embryonic day 14.5
(more )
Specimen
2E:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Specimen
E16.5 midbrain not shown:
embryonic day 16.5
(more )
Specimen
E16.5 midbrain not shown:
(close )
Genetic Background:
|
Not Specified
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Age:
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embryonic day 16.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS24: midbrain |
Present |
Regionally restricted |
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From 16.5 days p.c. onward, expression domains narrowed rostrally.
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Specimen
2G:
embryonic day 18.5
(more )
Specimen
2G:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS26: forebrain |
Weak |
Regionally restricted |
2G
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Expression decreased approximately to that of background. Expression patterns were maintained until 18.5 days p.c.
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TS26: telencephalon |
Trace |
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2G
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Minimal expression in the telencephalon.
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TS26: pretectum |
Present |
Regionally restricted |
2G
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Expression in D1 (ventral thalamus and hypothalamus), D3 and D4 (pretectal) regions and zona limitans intrathalamica. High expression in D2 (dorsal thalamus)
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TS26: thalamus |
Present |
Regionally restricted |
2G
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Expression in D1 (ventral thalamus and hypothalamus), D3 and D4 (pretectal) regions and zona limitans intrathalamica. High expression in D2 (dorsal thalamus)
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TS26: tectum |
Present |
Regionally restricted |
2G
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Expression restricted to an anterior strip of the tectum.
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Specimen
3A:
embryonic day 11.5
(more )
Specimen
3A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Cryosection
|
Structure |
Level |
Pattern |
Image |
Note |
TS19: hindbrain |
Strong |
Regionally restricted |
3A
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High levels of expression in a portion of the hindbrain neurothelium just lateral to the floor plate. Lower level of expression in the rest of the hindbrain neurothelium.
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Specimen
3C:
embryonic day 14.5
(more )
Specimen
3C:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS22: spinal cord |
Present |
Regionally restricted |
3C
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Expression in most regions of the spinal cord. Expression in spinal motor neurons from 10.5 days. p.c. onwards.
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Specimen
E16.5 spinal cord not shown:
embryonic day 16.5
(more )
Specimen
E16.5 spinal cord not shown:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS24: spinal cord |
Present |
Regionally restricted |
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No expression in somatic motor neurons from 16 days p.c. Authors report expression persisted longer in the lateral horn.
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Specimen
3E:
embryonic day 18.5
(more )
Specimen
3E:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
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Cryosection
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Structure |
Level |
Pattern |
Image |
Note |
TS26: spinal cord |
Present |
Uniform |
3E
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Homogeneous expression in the entire spinal cord.
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