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Gene Expression Data
Assay Details
Assay
Reference: J:102297 Canterini S, et al., Thg-1 pit gene expression in granule cells of the developing mouse brain and in their synaptic targets, mature Purkinje, and mitral cells. Dev Dyn. 2005 Nov;234(3):689-97
Assay type: RNA in situ
MGI Accession ID: MGI:5544821
Gene symbol: Tsc22d4
Gene name: Tsc22 domain family, member 4
Probe: Thg-1pit cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: A second probe MGI:5544819 gave comparable results.
Results
Specimen 1A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: brain Present Regionally restricted 1A Expression was detected at the level of all ventricles.

Specimen 1C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebellum primordium Strong 1C Strong signal was observed at the fourth ventricle, with particular reference to the rhombic lip.

Specimen 1D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex subventricular zone Present 1D
TS20: telencephalon mantle layer Present 1D
TS20: lateral ganglionic eminence Present 1D

Specimen 2A,B: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present Widespread 2B , 2A Expression was detected in the entire external granule layer, including both the most superficial layer (rapidly proliferating) and the deeper one (postmitotic, differentiating).

Specimen 2C: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex subventricular zone Present Regionally restricted 2C Expression was detected in the subventricular zone of the anterior lateral ventricles.
TS28: rostral migratory stream Strong Regionally restricted 2C Strong expression was detected in the entire rostral migratory stream. Expression was also detected in the ventral migratory mass.

Specimen 2D,E: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Strong 2D , 2E Expression was detected in differentiated granule cells.
TS28: main olfactory bulb Strong 2E , 2D Expression was detected in differentiated granule cells and in periglomerular cells.

Specimen 2F: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: telencephalon Present Regionally restricted 2F Expression was detected in basal forebrain interneurons.
TS28: islands of Calleja Present Regionally restricted 2F Expression was detected in island of Calleja interneurons.

Specimen 2G: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present 2G

Specimen not shown: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: medulla oblongata Present Scattered
TS28: pons Present Scattered

Specimen 4A,B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum granule cell layer Strong 4B , 4A

Specimen 4C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Present 4C

Specimen 4D: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Absent 4D

Specimen not shown: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Trace Single cells

Specimen 5A,B: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb granule cell layer Present 5B , 5A Expression was detected in granule cells.
TS28: main olfactory bulb Present Regionally restricted 5A , 5B Expression was detected in granule cells and periglomerular cells.

Specimen 5C: postnatal adult (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 5C

Specimen 5D: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: main olfactory bulb mitral cell layer Present 5D

Specimen 5E: postnatal adult (more )
Structure Level Pattern Image Note
TS28: rostral migratory stream Present Regionally restricted 5E Expression was detected in the entire rostral migratory stream.
TS28: telencephalon subventricular zone Present Regionally restricted 5E Expression in subventricular zone of anterior lateral ventricle.
TS28: main olfactory bulb Present 5E

Specimen 5F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: telencephalon Present Regionally restricted 5F Expression was detected in cells derived from the ventral migratory mass in the basal forebrain.
TS28: islands of Calleja Present 5F
TS28: olfactory tubercle Present 5F

Specimen 5G: postnatal adult (more )
Structure Level Pattern Image Note
TS28: dentate gyrus granule cell layer Present 5G

Specimen not shown: postnatal adult (more )
Structure Level Pattern Image Note
TS28: medulla oblongata Present Scattered
TS28: pons Present Scattered


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory