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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5542001
Gene symbol: Ccnd1
Gene name: cyclin D1
Probe: RIKEN clone G530104I03 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:11180: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:11180
TS23: metanephros Present GUDMAP:11180
TS23: nephrogenic zone Present GUDMAP:11180
TS23: renal cortex Present GUDMAP:11180
TS23: renal medulla Present GUDMAP:11180
TS23: early tubule Present GUDMAP:11180
TS23: early nephron Present GUDMAP:11180
TS23: renal medullary interstitium Present Regionally restricted GUDMAP:11180
TS23: renal vesicle Present Graded GUDMAP:11180 Strong expression in distal renal vesicle. Weak or absent expression in proximal renal vesicle.
TS23: comma-shaped body Present GUDMAP:11180
TS23: s-shaped body Present GUDMAP:11180
TS23: pretubular aggregate Present GUDMAP:11180
TS23: nephrogenic interstitium Absent GUDMAP:11180
TS23: cap mesenchyme Absent GUDMAP:11180
TS23: ureteric tip Absent GUDMAP:11180
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:11180
TS23: medullary collecting duct Absent GUDMAP:11180
TS23: cortical collecting duct Absent GUDMAP:11180
TS23: maturing renal corpuscle Absent GUDMAP:11180
TS23: renal cortical interstitium Absent GUDMAP:11180
TS23: renal cortical vasculature Absent GUDMAP:11180
TS23: ureter Present GUDMAP:11180
TS23: ureteral mesenchyme Present GUDMAP:11180
TS23: ureteral smooth muscle layer Present GUDMAP:11180
TS23: urothelium of ureter Absent GUDMAP:11180
TS23: ureteral mesenchyme outer layer Absent GUDMAP:11180
TS23: renal pelvis Present GUDMAP:11180
TS23: pelvic smooth muscle Present GUDMAP:11180
TS23: pelvic urothelial lining Absent GUDMAP:11180
TS23: perihilar interstitium Absent GUDMAP:11180
TS23: upper limb of comma-shaped body Present GUDMAP:11180
TS23: lower limb of comma-shaped body Present GUDMAP:11180
TS23: capillary loop renal corpuscle Absent GUDMAP:11180
TS23: distal segment of s-shaped body Present GUDMAP:11180
TS23: medial segment of s-shaped body Present GUDMAP:11180
TS23: proximal segment of s-shaped body Absent GUDMAP:11180
TS23: immature loop of Henle Present GUDMAP:11180
TS23: maturing nephron Present GUDMAP:11180
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:11180
TS23: cortical renal tubule Present GUDMAP:11180
TS23: cortical early proximal tubule Present Regionally restricted GUDMAP:11180 Detected in early proximal tubule of capillary loop stage nephrons only. Absent from early proximal tubule of maturing nephrons.
TS23: anlage of loop of Henle of cortical renal tubule Present GUDMAP:11180
TS23: cortical early distal tubule Ambiguous GUDMAP:11180 Possible weak expression in early distal tubule of capillary loop stage nephrons only. Expression absent from early distal tubule of older maturing nephrons.
TS23: renal connecting tubule Absent GUDMAP:11180
TS23: developing capillary loop stage nephron group Present GUDMAP:11180
TS23: late tubule Present GUDMAP:11180
TS23: distal renal vesicle Present GUDMAP:11180
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:11180
TS23: early proximal tubule of capillary loop nephron Present GUDMAP:11180
TS23: renal connecting segment of renal vesicle Absent GUDMAP:11180
TS23: renal connecting segment of comma-shaped body Absent GUDMAP:11180
TS23: cortical renal tubule of maturing nephron group Absent GUDMAP:11180
TS23: proximal renal vesicle Ambiguous GUDMAP:11180
TS23: early distal tubule of capillary loop nephron Ambiguous GUDMAP:11180
Specimen GUDMAP:11181: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureteral mesenchyme Present GUDMAP:11181
TS23: ureter Present GUDMAP:11181
TS23: urinary system Present GUDMAP:11181
TS23: urothelium of ureter Absent GUDMAP:11181
TS23: ureteral vasculature Absent GUDMAP:11181
TS23: ureteral mesenchyme outer layer Absent GUDMAP:11181
TS23: ureteral smooth muscle layer Present GUDMAP:11181
Specimen GUDMAP:11377: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple. This color reaction was for 25 hours; thus, expression levels are quite high.
Structure Level Pattern Image Note
TS28: urinary system Present GUDMAP:11377
TS28: metanephros Present GUDMAP:11377
TS28: renal cortex Present GUDMAP:11377
TS28: cortical renal tubule Present GUDMAP:11377
TS28: renal distal tubule Present GUDMAP:11377
TS28: distal convoluted tubule Present GUDMAP:11377
TS28: distal straight tubule of renal cortex Present GUDMAP:11377
TS28: renal medulla Present GUDMAP:11377
TS28: outer renal medulla Present GUDMAP:11377
TS28: loop of Henle, outer medullary portion Present GUDMAP:11377
TS28: premacula segment of distal straight tubule of outer medulla Present GUDMAP:11377
TS28: outer stripe of outer medulla Present GUDMAP:11377
TS28: loop of Henle of outer stripe of outer medulla Present GUDMAP:11377
TS28: distal straight tubule of outer stripe of outer medulla Present GUDMAP:11377
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla Present GUDMAP:11377
TS28: loop of Henle of inner stripe of outer medulla Present GUDMAP:11377
TS28: inner stripe of outer medulla Present GUDMAP:11377
TS28: mature renal corpuscle Absent GUDMAP:11377
TS28: renal proximal tubule Absent GUDMAP:11377
TS28: renal connecting tubule Absent GUDMAP:11377
TS28: renal cortical interstitium Absent GUDMAP:11377
TS28: renal cortical vasculature Absent GUDMAP:11377
TS28: thin descending limb of outer medulla Absent GUDMAP:11377
TS28: thin ascending limb of outer medulla Absent GUDMAP:11377
TS28: proximal straight tubule, outer medullary portion Absent GUDMAP:11377
TS28: outer medullary interstitium Absent GUDMAP:11377
TS28: proximal straight tubule of outer stripe of outer medulla Absent GUDMAP:11377
TS28: thin descending limb of inner stripe of outer medulla Absent GUDMAP:11377
TS28: renal medullary vasculature Absent GUDMAP:11377
TS28: mature nephron Present GUDMAP:11377
TS28: loop of Henle Present GUDMAP:11377
TS28: cortical collecting duct Ambiguous GUDMAP:11377 Possible weak expression in some cortical collecting duct.
TS28: outer medullary collecting duct Ambiguous GUDMAP:11377 Possible expression in outer medullary collecting duct - identification of this duct unclear.
TS28: collecting duct Ambiguous GUDMAP:11377
TS28: inner renal medulla Absent GUDMAP:11377
TS28: renal pelvis Absent GUDMAP:11377
TS28: renal interstitium Absent GUDMAP:11377
TS28: renal small blood vessel Absent GUDMAP:11377
TS28: renal capillary Absent GUDMAP:11377
TS28: inner medullary interstitium Absent GUDMAP:11377
Specimen GUDMAP:11378: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple. This color reaction was for 25 hours; thus, expression levels are quite high.
Structure Level Pattern Image Note
TS28: ureter Absent GUDMAP:11378
TS28: urinary system Present GUDMAP:11378
TS28: metanephros Present GUDMAP:11378
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory