About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541942
Gene symbol: Cltrn
Gene name: collectrin, amino acid transport regulator
Probe: RIKEN clone 0610008J07 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:10024: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: genitourinary system Ambiguous GUDMAP:10024 expression uncertain
Specimen GUDMAP:10386: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present GUDMAP:10386
TS21: mesonephros of male Present Regionally restricted GUDMAP:10386
TS21: mesonephric tubule of male Present GUDMAP:10386
TS21: testis Present Regionally restricted GUDMAP:10386
TS21: primary sex cord Present GUDMAP:10386
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:10386
TS21: paramesonephric duct of male, rest of Absent GUDMAP:10386
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:10386
TS21: interstitium of the testis Absent GUDMAP:10386
TS21: mesonephric mesenchyme of male Ambiguous GUDMAP:10386 uncertain expression
TS21: nephric duct of male, mesonephric portion Ambiguous GUDMAP:10386 possible expression
TS21: nephric duct of male, rest of Ambiguous GUDMAP:10386 possible expression
Specimen GUDMAP:10387: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: ureter Absent GUDMAP:10387
TS21: metanephros Ambiguous GUDMAP:10387 uncertain expression
Specimen GUDMAP:10388: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the urogenital sinus is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present GUDMAP:10388
TS21: urogenital sinus Present Regionally restricted GUDMAP:10388
TS21: primitive bladder Present GUDMAP:10388
TS21: ureter Absent GUDMAP:10388
Specimen GUDMAP:10389: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present GUDMAP:10389
TS21: mesonephros of female Present Regionally restricted GUDMAP:10389
TS21: mesonephric tubule of female Present GUDMAP:10389
TS21: ovary Present GUDMAP:10389
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:10389
TS21: nephric duct of female, rest of Absent GUDMAP:10389
TS21: paramesonephric duct of female, rest of Absent GUDMAP:10389
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:10389
TS21: mesonephric mesenchyme of female Ambiguous GUDMAP:10389 uncertain expression
TS21: paramesonephric duct of female, mesonephric portion Ambiguous GUDMAP:10389 possible expression
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory