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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541893
Gene symbol: Nr3c1
Gene name: nuclear receptor subfamily 3, group C, member 1
Probe: RIKEN clone F730215N04 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:13613: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: male reproductive system Present GUDMAP:13613
TS23: genital tubercle of male Present GUDMAP:13613 Expression in the mesenchyme of glans and preputial swelling in a restricted pattern at base of the glans and in the core of the genital tubercle.
TS23: scrotal swelling Present GUDMAP:13613
TS23: male external genitalia Present GUDMAP:13613
TS23: scrotal swelling skin Present Regionally restricted GUDMAP:13613 Expression appears to be regionalized to the basal epithelial cells.
TS23: mesenchyme of scrotal swelling Absent GUDMAP:13613
TS23: skin of glans of male genital tubercle Absent GUDMAP:13613
TS23: skin of male preputial swelling Present GUDMAP:13613
TS23: preputial swelling of male Present GUDMAP:13613
TS23: glans of male genital tubercle Present GUDMAP:13613
TS23: mesenchyme of glans of male genital tubercle Present Regionally restricted GUDMAP:13613
TS23: epithelium of phallic urethra of male Present GUDMAP:13613 Expression detected in the proximal urethral epithelium/phallic urethral epithelium/urethral plate. The distal urethral epithelium was not examined.
TS23: urethral tube epithelium of male Present GUDMAP:13613
TS23: mesenchyme of male preputial swelling Present Regionally restricted GUDMAP:13613

Specimen GUDMAP:13614: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: bladder Present GUDMAP:13614
TS23: urinary system Present GUDMAP:13614
TS23: urethra of male Present GUDMAP:13614
TS23: pelvic urethra of male Present GUDMAP:13614
TS23: phallic urethra of male Present GUDMAP:13614
TS23: urothelium of bladder Present Graded GUDMAP:13614 May be graded expression in bladder epithelium - appears weaker in neck of bladder where ureter epithelium enters.
TS23: urethral plate epithelium of male Present GUDMAP:13614
TS23: epithelium of pelvic urethra of male Present GUDMAP:13614
TS23: lamina propria of bladder Present GUDMAP:13614
TS23: detrusor muscle of bladder Absent GUDMAP:13614
TS23: serosa of bladder Absent GUDMAP:13614
TS23: adventitia of bladder Absent GUDMAP:13614
TS23: vasculature of bladder Absent GUDMAP:13614
TS23: mesenchymal layer of pelvic urethra of male Absent GUDMAP:13614
TS23: muscle layer of pelvic urethra of male Absent GUDMAP:13614
TS23: urothelium of ureter Absent GUDMAP:13614
TS23: urothelium of bladder fundus Present GUDMAP:13614
TS23: urothelium of ventral bladder neck Present GUDMAP:13614

Specimen GUDMAP:13615: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: female reproductive system Present GUDMAP:13615
TS23: epithelium of phallic urethra of female Present GUDMAP:13615
TS23: urethral tube epithelium of female Present GUDMAP:13615
TS23: genital tubercle of female Present GUDMAP:13615
TS23: urethral plate epithelium of female Ambiguous GUDMAP:13615
TS23: preputial swelling of female Ambiguous GUDMAP:13615
TS23: skin of female preputial swelling Ambiguous GUDMAP:13615
TS23: glans of female genital tubercle Ambiguous GUDMAP:13615
TS23: genital tubercle mesenchyme of female Ambiguous GUDMAP:13615
TS23: labial swelling Ambiguous GUDMAP:13615
TS23: labial swelling skin Ambiguous GUDMAP:13615
TS23: mesenchyme of female preputial swelling Absent GUDMAP:13615
TS23: mesenchyme of glans of female genital tubercle Absent GUDMAP:13615
TS23: developing vasculature of female genital tubercle Absent GUDMAP:13615
TS23: mesenchyme of labial swelling Absent GUDMAP:13615
TS23: female external genitalia Present GUDMAP:13615 Weak expression in phallic urethra epithelium/urethral plate epithelium. Uncertain if signal detected in surface epithelia of genital tubercle and labioscrotal swelling is gene expression or background staining. Signal detected in skin surface epithelium of embryo appears to be true expression.

Specimen GUDMAP:13616: embryonic day 15.5 (more )
Note: This specimen was generated and annotated by the lab of Melissa H. Little, Murdoch Children's Research Institute. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: bladder Present GUDMAP:13616
TS23: urinary system Present GUDMAP:13616
TS23: urethra of female Present GUDMAP:13616
TS23: pelvic urethra of female Present GUDMAP:13616
TS23: phallic urethra of female Present GUDMAP:13616
TS23: urothelium of bladder Present GUDMAP:13616
TS23: urethral plate epithelium of female Present GUDMAP:13616
TS23: lamina propria of bladder Present GUDMAP:13616
TS23: detrusor muscle of bladder Absent GUDMAP:13616
TS23: serosa of bladder Absent GUDMAP:13616
TS23: adventitia of bladder Absent GUDMAP:13616
TS23: vasculature of bladder Absent GUDMAP:13616
TS23: mesenchymal layer of pelvic urethra of female Absent GUDMAP:13616
TS23: muscle layer of pelvic urethra of female Absent GUDMAP:13616
TS23: epithelium of pelvic urethra of female Present GUDMAP:13616


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last database update
03/24/2026
MGI 6.24
The Jackson Laboratory