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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5540826
Gene symbol: Pid1
Gene name: phosphotyrosine interaction domain containing 1
Probe: RIKEN clone C630031J22 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:8901: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: gonad primordium Absent GUDMAP:8901
TS17: nephric duct, mesonephric portion Absent GUDMAP:8901
TS17: genitourinary system Ambiguous GUDMAP:8901
TS17: genitourinary system mesenchyme Ambiguous GUDMAP:8901 possible expression
TS17: mesonephros Ambiguous GUDMAP:8901
TS17: mesonephros mesenchyme Ambiguous GUDMAP:8901 uncertain signal in the dorsal mesonephros
TS17: mesonephric tubule Ambiguous GUDMAP:8901
TS17: metanephric mesenchyme Ambiguous GUDMAP:8901 uncertain signal in the dorsal metanephros
TS17: nephric duct, metanephric portion Ambiguous GUDMAP:8901 signal seen in nephric duct lumen may be trapping
TS17: nephric duct Ambiguous GUDMAP:8901
Specimen GUDMAP:8902: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: male reproductive system Present Regionally restricted GUDMAP:8902
TS21: mesonephros of male Present Regionally restricted GUDMAP:8902
TS21: mesonephric mesenchyme of male Present Regionally restricted GUDMAP:8902 medial expression
TS21: testis Present Regionally restricted GUDMAP:8902
TS21: primary sex cord Present GUDMAP:8902
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:8902
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:8902
TS21: epithelium of nephric duct of male Absent GUDMAP:8902
TS21: paramesonephric duct of male, rest of Absent GUDMAP:8902
TS21: epithelium of rest of paramesonephric duct of male Absent GUDMAP:8902
TS21: mesenchyme of rest of paramesonephric duct of male Absent GUDMAP:8902
TS21: coelomic epithelium of testis Absent GUDMAP:8902
TS21: interstitium of the testis Absent GUDMAP:8902
TS21: mesonephric tubule of male Ambiguous GUDMAP:8902 expression is likely to be absent
TS21: nephric duct of male, mesonephric portion Ambiguous GUDMAP:8902 expression is likely to be absent
TS21: nephric duct of male, rest of Ambiguous GUDMAP:8902 expression is likely to be absent
TS21: mesenchyme of nephric duct of male Ambiguous GUDMAP:8902 expression is likely to be absent
Specimen GUDMAP:8903: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8903
TS21: metanephros Present Regionally restricted GUDMAP:8903 spot signal pattern seen may be early tubules in the nephrogenic zone
TS21: renal pelvis Present GUDMAP:8903
TS21: ureter Present GUDMAP:8903 signal pattern is broader than the urothelium but signal appears absent from the outermost layer of the ureter
TS21: renal interstitium Present GUDMAP:8903
TS21: cap mesenchyme Absent GUDMAP:8903
TS21: ureteric tip Absent GUDMAP:8903
TS21: early nephron Ambiguous GUDMAP:8903
TS21: ureteric tree terminal branch excluding tip itself Ambiguous GUDMAP:8903
TS21: primitive collecting duct Ambiguous GUDMAP:8903
TS21: ureteric trunk Ambiguous GUDMAP:8903
TS21: nephrogenic zone Ambiguous GUDMAP:8903
TS21: nephrogenic interstitium Ambiguous GUDMAP:8903
Specimen GUDMAP:8904: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the male expression pattern in the lower urinary tract is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:8904
TS21: ureter Present GUDMAP:8904 signal pattern is broader than the urothelium but signal appears absent from the outermost layer of the ureter
TS21: ureteral mesenchyme Present GUDMAP:8904
TS21: primitive bladder Absent GUDMAP:8904
TS21: urothelium of ureter Ambiguous GUDMAP:8904
Specimen GUDMAP:8905: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:8905
TS21: mesonephros of female Present Regionally restricted GUDMAP:8905
TS21: mesonephric mesenchyme of female Present Regionally restricted GUDMAP:8905
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:8905
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:8905
TS21: paramesonephric duct of female, rest of Absent GUDMAP:8905
TS21: ovary Absent GUDMAP:8905
TS21: epithelium of nephric duct of female Absent GUDMAP:8905
TS21: mesonephric tubule of female Ambiguous GUDMAP:8905 expression is likely to be absent
TS21: nephric duct of female, mesonephric portion Ambiguous GUDMAP:8905 expression is likely to be absent
TS21: nephric duct of female, rest of Ambiguous GUDMAP:8905 expression is likely to be absent
TS21: mesenchyme of nephric duct of female Ambiguous GUDMAP:8905
Specimen GUDMAP:9898: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9898
TS23: metanephros Present Regionally restricted GUDMAP:9898
TS23: nephrogenic zone Present Regionally restricted GUDMAP:9898
TS23: nephrogenic interstitium Present GUDMAP:9898
TS23: renal cortex Present Regionally restricted GUDMAP:9898
TS23: renal cortical interstitium Present GUDMAP:9898
TS23: renal medulla Present Regionally restricted GUDMAP:9898
TS23: renal medullary interstitium Present GUDMAP:9898
TS23: renal pelvis Present Regionally restricted GUDMAP:9898
TS23: perihilar interstitium Present GUDMAP:9898
TS23: pelvic smooth muscle Present GUDMAP:9898
TS23: renal interstitium Present GUDMAP:9898
TS23: pretubular aggregate Absent GUDMAP:9898
TS23: ureteric tip Absent GUDMAP:9898
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9898
TS23: renal vesicle Absent GUDMAP:9898
TS23: comma-shaped body Absent GUDMAP:9898
TS23: s-shaped body Absent GUDMAP:9898
TS23: capillary loop renal corpuscle Absent GUDMAP:9898
TS23: maturing renal corpuscle Absent GUDMAP:9898
TS23: cortical renal tubule Absent GUDMAP:9898
TS23: renal connecting tubule Absent GUDMAP:9898
TS23: cortical collecting duct Absent GUDMAP:9898
TS23: renal cortical vasculature Absent GUDMAP:9898
TS23: immature loop of Henle Absent GUDMAP:9898
TS23: renal medullary vasculature Absent GUDMAP:9898
TS23: medullary collecting duct Absent GUDMAP:9898
TS23: pelvic urothelial lining Absent GUDMAP:9898
TS23: developing capillary loop stage nephron group Absent GUDMAP:9898
TS23: maturing nephron Absent GUDMAP:9898
TS23: collecting duct Absent GUDMAP:9898
TS23: renal vasculature Absent GUDMAP:9898
TS23: early nephron Absent GUDMAP:9898
TS23: late tubule Absent GUDMAP:9898
TS23: cap mesenchyme Ambiguous GUDMAP:9898 possible weak expression detected in cap mesenchyme.
Specimen GUDMAP:9899: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present Regionally restricted GUDMAP:9899
TS23: ureteral mesenchyme Present GUDMAP:9899
TS23: ureteral smooth muscle layer Present GUDMAP:9899
TS23: ureteral mesenchyme outer layer Present GUDMAP:9899
TS23: urothelium of ureter Absent GUDMAP:9899
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory