Gene Expression Data
Assay Details
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Assay
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Reference:
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J:53565
Whitlon DS, et al., Tenascin-C in the cochlea of the developing mouse. J Comp Neurol. 1999 Apr 12;406(3):361-74
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Assay type:
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Immunohistochemistry
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MGI Accession ID:
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MGI:5523936
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Gene symbol:
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Tnc
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Gene name:
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tenascin C
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Antibody:
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anti-tenascin
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Detection system:
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Secondary antibody coupled to horseradish peroxidase
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Results
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Specimen
1A:
embryonic day 14.5
(more )
Specimen
1A:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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embryonic day 14.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cochlea |
Present |
Regionally restricted |
1A
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Expression was detected in radially oriented stripes that fanned out to form a diffuse spiral band in the spiral lamina. Puncta of immunoreactivity were detected in the organ of Corti along the inner pillar cells.
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Specimen
1B:
embryonic day 16.5
(more )
Specimen
1B:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 16.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: cochlea |
Present |
Regionally restricted |
1B
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The radial pattern of expression in the spiral lamina was more elongated than at E14.5, and the spiral pattern was not as prominent.
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Specimen
1D:
postnatal day 3
(more )
Specimen
1D:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
1D
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Expression accumulates around cells in both the inner and outer hair cell regions.
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Specimen
1E:
embryonic day 14.5
(more )
Note: Basal turn of a cochlea.
Specimen
1E:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 14.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
|
4% Paraformaldehyde
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Note:
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Basal turn of a cochlea.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cochlea |
Present |
Regionally restricted |
1E
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Expression was detected in the inner and outer hair cell regions in the basal turn of the organ of Corti. Small and large puncta of label were beneath outer hair cells, and Deiters' cells were outlined with label.
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Specimen
1F:
embryonic day 14.5
(more )
Note: Apical turn of a cochlea.
Specimen
1F:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 14.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Apical turn of a cochlea.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cochlea |
Present |
Regionally restricted |
1F
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There was a limited amount of labeling in the inner hair cell region of the apical turn of the organ of Corti. No label was in the outer hair cell region.
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Specimen
2A:
embryonic day 16.5
(more )
Specimen
2A:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 16.5
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|
Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
|
whole mount
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|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: organ of Corti |
Present |
Regionally restricted |
2A
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The strongest labeling in the inner hair cell region was between the inner sensory cells and the inner pillar cells. Large accumulations of label were detected beneath the synaptic region of outer hair cells.
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Specimen
2B:
embryonic day 16.5
(more )
Note: Embedded in methacrylate.
Specimen
2B:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 16.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Resin/plastic
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Note:
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Embedded in methacrylate.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: organ of Corti |
Present |
Regionally restricted |
2B
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Strongest label in the inner hair cell (IHC) region was between inner sensory and inner pillar cells. Little label was on the modiolar side of IHC. Label was beneath the synaptic region of outer hair cells. Faint label was at the apical end of hair cells.
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Specimen
2C:
embryonic day 16.5
(more )
Specimen
2C:
(close )
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Genetic Background:
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Ha:ICR
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Age:
|
embryonic day 16.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: organ of Corti |
Present |
Regionally restricted |
2C
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Strongest label in the inner hair cell (IHC) region was between inner sensory and inner pillar cells. Small puncta of label were beneath outer hair cells in the apical turn of the organ of Corti. The lateral edges of Deiters' cells were outlined.
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Specimen
2D:
postnatal newborn
(more )
Note: Embedded in methacrylate.
Specimen
2D:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal newborn
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Resin/plastic
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Note:
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Embedded in methacrylate.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
2D
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Strongest label in the inner hair cell (IHC) region was between inner sensory and inner pillar cells. Label was beneath the synaptic region of outer hair cells. Faint label was at the apical end of hair cells. Label continued to surround Deiters' cells.
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Specimen
2E:
postnatal day 2
(more )
Note: Embedded in methacrylate.
Specimen
2E:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 2
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Resin/plastic
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Note:
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Embedded in methacrylate.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
2E
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The strongest labeling in the inner hair cell region was between the inner sensory cells and the inner pillar cells. After birth fewer and fewer labeled puncta can be detected around the Deiters' cells.
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Specimen
2F:
postnatal day 3
(more )
Note: Embedded in methacrylate.
Specimen
2F:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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|
Embedding:
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Resin/plastic
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Note:
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Embedded in methacrylate.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
2F
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Strongest label in the inner hair cell (IHC) region was between inner sensory and inner pillar cells. Label was on the modiolar side of IHC in the basal turn. After birth fewer and fewer labeled puncta can be detected around the Deiters' cells.
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Specimen
2G:
postnatal day 3
(more )
Specimen
2G:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
2G
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At a level closer to the basilar membrane, label dotted the region between the inner hair and inner pillar cells. After birth fewer and fewer labeled puncta can be detected around the Deiters' cells.
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Specimen
2H:
postnatal day 3
(more )
Specimen
2H:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
2H
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At a slightly higher level than in 2G, the apical ends of the pillar cells were labeled. Outer hair cells were unlabeled. Labeling was on the modiolar side of inner hair cells in the basal turn.
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Specimen
3A:
postnatal day 3
(more )
Specimen
3A:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
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4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
3A
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In the apical turn, labeling increases around Deiters' cells.
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Specimen
3B:
postnatal day 3
(more )
Specimen
3B:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 3
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Sex:
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Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS27: organ of Corti |
Present |
Regionally restricted |
3B
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Large accumulations of immunolabel are detected beneath the synaptic region of outer hair cells in the apical turn. Labeling increases around Deiters' cells.
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Specimen
3C:
postnatal day 7
(more )
Specimen
3C:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 7
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
|
4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: organ of Corti |
Present |
Regionally restricted |
3C
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Labeling remains on the modiolar side of inner hair cells in the apical turn. Only sparse labeling around Deiters' cells can be detected in the apical turn, although pillar cells are labeled.
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Specimen
3D:
postnatal day 7
(more )
Specimen
3D:
(close )
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Genetic Background:
|
Ha:ICR
|
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Age:
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postnatal day 7
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Sex:
|
Not Specified
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Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: organ of Corti |
Present |
Regionally restricted |
3D
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Only sparse labeling around Deiters' cells can be detected in the apical turn, although pillar cells are labeled.
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Specimen
3E:
postnatal day 15
(more )
Specimen
3E:
(close )
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Genetic Background:
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Ha:ICR
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Age:
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postnatal day 15
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Sex:
|
Not Specified
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Type:
|
whole mount
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Fixation:
|
4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: organ of Corti |
Present |
Regionally restricted |
3E
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Immunoreactivity in the inner hair cell region is confined to widely scattered, small puncta beneath the inner hair cell.
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Specimen
3F:
postnatal day 15
(more )
Note: Embedded in methacrylate.
Specimen
3F:
(close )
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Genetic Background:
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Ha:ICR
|
|
Age:
|
postnatal day 15
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Sex:
|
Not Specified
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Type:
|
section from whole mount
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|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Resin/plastic
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|
Note:
|
Embedded in methacrylate.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS28: organ of Corti |
Present |
Regionally restricted |
3F
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Immunoreactivity in the organ of Corti has disappeared except for widely scattered, small puncta beneath the inner hair cell.
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| TS28: basilar membrane |
Strong |
Regionally restricted |
3F
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Strong labeling was detected along the basilar membrane.
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Specimen
4A:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Srrm4bv/Srrm4bv
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Age:
|
embryonic day 17.5
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Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
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Sex:
|
Not Specified
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Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: organ of Corti |
Strong |
Regionally restricted |
4A
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Strong immunoreactivity was detected in rounded-up inner hair cells in the basal turn.
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Specimen
4B:
(close )
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Genetic Background:
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Not Specified
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Mutant Allele(s):
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Srrm4bv/Srrm4bv
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Age:
|
embryonic day 18.5
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Age Note:
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Age normalized so that noon of plug day = E0.5.
|
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Sex:
|
Not Specified
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Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS26: organ of Corti |
Present |
Regionally restricted |
4B
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Immunolabel fills the entire cytoplasm of the cell.
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Specimen
4C:
embryonic day 18.5; Srrm4bv/ Srrm4bv
(more )
Note: Embedded in methacrylate.
Specimen
4C:
(close )
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Genetic Background:
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Not Specified
|
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Mutant Allele(s):
|
Srrm4bv/Srrm4bv
|
|
Age:
|
embryonic day 18.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Resin/plastic
|
|
Note:
|
Embedded in methacrylate.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS26: organ of Corti |
Present |
Regionally restricted |
4C
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Immunolabel fills the entire cytoplasm of the inner hair cell. Expression remains along the inner pillar cells beneath the outer hair cells.
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Specimen
4D:
(close )
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Genetic Background:
|
Not Specified
|
|
Mutant Allele(s):
|
Srrm4bv/Srrm4bv
|
|
Age:
|
embryonic day 18.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS26: organ of Corti |
Present |
Regionally restricted |
4D
|
Immunoreactivity was detected at the apical ends of the hair cells.
|
Specimen
4E:
embryonic day 16.5
(more )
Specimen
4E:
(close )
|
Genetic Background:
|
Ha:ICR
|
|
Age:
|
embryonic day 16.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS24: organ of Corti |
Present |
Regionally restricted |
4E
|
Apical ends of inner hair cells were labeled.
|
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