Gene Expression Data
Assay Details
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Assay
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Reference:
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J:135584
Fedtsova N, et al., Regulation of the development of tectal neurons and their projections by transcription factors Brn3a and Pax7. Dev Biol. 2008 Apr 1;316(1):6-20
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Assay type:
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In situ reporter (knock in)
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MGI Accession ID:
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MGI:5516015
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Gene symbol:
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Pou4f1
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Gene name:
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POU domain, class 4, transcription factor 1
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Results
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Specimen
5C/D:
embryonic day 16.5; Pou4f1tm1Et/Pou4f1 +
(more  )
Specimen
5C/D:
(close  )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: midbrain tegmentum |
Present |
Regionally restricted |
5C
,
5D
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Expressed in the rubrospinal tract but not the decussating fibers of the crossed tectobulbar.
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Specimen
5E/F:
embryonic day 16.5; Pou4f1tm1Et/Pou4f1 +
(more )
Specimen
5E/F:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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embryonic day 16.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS24: midbrain tegmentum |
Present |
Regionally restricted |
5E
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5F
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Expressed in the ipsilateral tectopontine tract (uncrossed tectobulbar tract), but not in the tectospinal tract.
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Specimen
5H:
postnatal day 10; Pou4f1tm1Et/Pou4f1 +
(more )
Specimen
5H:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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postnatal day 10
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS28: midbrain |
Present |
Regionally restricted |
5L
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5K
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5H
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5I
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Expressed in the red nucleus and ipsilateral tectopontine tract, but not the the decussating fibers of the tectospinal tract.
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| TS28: red nucleus |
Present |
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5H
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5K
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5L
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| TS28: habenula |
Present |
Regionally restricted |
5K
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5H
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5L
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Expressed in fasciculus retroflexus.
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| TS28: midbrain tegmentum |
Present |
Regionally restricted |
5H
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5I
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Expressed in the uncrossed tectobulbar tract which appears as diffuse fibers in the lateral tegmentum.
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Specimen
S2A:
embryonic day 18.5; Pou4f1tm1Et/Pou4f1 +
(more )
Specimen
S2A:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2A
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Expressed in the red nucleus, but not the fibers of the crossed tectobulbar tract.
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Specimen
S2B:
(close )
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Genetic Background:
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involves: 129S7/SvEvBrd * 129/Sv
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1tm1Nat
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2B
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Expressed in the red nucleus, but not the fibers of the crossed tectobulbar tract.
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Specimen
S2C/G/H:
embryonic day 18.5; Pou4f1tm1Et/Pou4f1 +
(more )
Specimen
S2C/G/H:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2C
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S2H
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S2G
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Expressed in the red nucleus and ipsilateral tectopontine tract, but not the the decussating fibers of the tectospinal tract.
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Specimen
S2D/I/J:
(close )
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Genetic Background:
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involves: 129S7/SvEvBrd * 129/Sv
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1tm1Nat
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2J
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S2I
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S2D
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Expressed in the red nucleus and ipsilateral tectopontine tract, but not the the decussating fibers of the tectospinal tract. Reduced extent of the red nucleus and ventral tegmental decussation, and the rubrospinal tract was nearly absent.
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Specimen
S2E:
embryonic day 18.5; Pou4f1tm1Et/Pou4f1 +
(more )
Specimen
S2E:
(close )
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Genetic Background:
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involves: 129
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1+
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2E
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Expressed in the red nucleus and ipsilateral tectopontine tract, but not the the decussating fibers of the tectospinal tract.
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Specimen
S2F:
(close )
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Genetic Background:
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involves: 129S7/SvEvBrd * 129/Sv
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Mutant Allele(s):
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Pou4f1tm1Et/Pou4f1tm1Nat
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Age:
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embryonic day 18.5
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS26: midbrain tegmentum |
Present |
Regionally restricted |
S2F
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Expressed in the red nucleus and ipsilateral tectopontine tract, but not the the decussating fibers of the tectospinal tract. The rubrospinal tract is absent.
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Analysis Tools
