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Gene Expression Data
Assay Details
Assay
Reference: J:183957 Wu F, et al., Onecut 1 and Onecut 2 are potential regulators of mouse retinal development. J Comp Neurol. 2012 Apr 1;520(5):952-69
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5509316
Gene symbol: Onecut1
Gene name: one cut domain, family member 1
Antibody: Anti-HNF-6 (H-100) sc-13050
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: retina Present Expression was detected in the nuclei.

Specimen 1A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: retina Present Regionally restricted 1A Expression was detected in both the ganglion cell layer and the neuroblast layer.

Specimen 1B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted 1B Expression was detected in both the ganglion cell layer and the neuroblast layer.

Specimen 1C: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: retina Present Regionally restricted 1C Expression was detected mainly in the ganglion cell layer.

Specimen 1D: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: retina ganglion cell layer Present 1D Expression in the ganglion cell layer was still high at P0.
TS27: retina layer Present Regionally restricted 1D Expression was detected in a row of regularly spaced cells located in the outer part of the retina.

Specimen 1E: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Weak 1E Expression in the ganglion cell layer decreased markedly at P5.
TS28: retina layer Present Regionally restricted 1E Expression was detected in a row of regularly spaced cells located in the outer part of the retina.

Specimen 1F: postnatal day 16 (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Weak 1F Expression in the ganglion cell layer decreased markedly at P16.
TS28: retina inner nuclear layer Present Regionally restricted 1F Expression was detected in the inner nuclear layer close to the boundary of the inner nuclear layer and outer plexiform layer.

Specimen not shown: embryonic day 11.5; Atoh7tm1.1Xmu/? (more )
Note: Also stained for Atoh7 reporter (assay MGI:5509320). This specimen could have been either heterozygous or homozygous for Math5HA.
Structure Level Pattern Image Note
TS19: retina Present Regionally restricted There was almost complete overlap of expression with Math5 in the neuroblast layer of the central retina.

Specimen 3A,A'',A''': embryonic day 12.5; Atoh7tm1.1Xmu/? (more )
Note: Double labeled: green - Onecut1; magenta - Atoh7 (assay MGI:5509320). This specimen could have been either heterozygous or homozygous for Math5HA.
Structure Level Pattern Image Note
TS20: retina Present Regionally restricted 3A'' , 3A , 3A''' There was almost complete overlap of expression with Math5 in the neuroblast layer of the central retina. Expression was also detected in the ganglion cell layer.

Specimen 3B,B'',B''': embryonic day 14.5; Atoh7tm1.1Xmu/? (more )
Note: Double labeled: green - Onecut1; magenta - Atoh7 (assay MGI:5509320). This specimen could have been either heterozygous or homozygous for Math5HA.
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted 3B''' , 3B , 3B'' Expression was detected in the ganglion cells layer. In the neuroblast layer, the overlap with Math5 was significantly reduced.

Specimen 3C,C'',C''': embryonic day 12.5 (more )
Note: Double labeled: green - Onecut1; magenta - Pou4f2 (assay MGI:5509319).
Structure Level Pattern Image Note
TS20: retina Present Regionally restricted 3C'' , 3C''' , 3C All retinal ganglion cells in the ganglion cell layer expressed both Pou4f2 and Oc1. In the neuroblast layer Pou4f2-positive cells expressed Oc1, but only a subset of Oc1-positive cells also expressed Pou4f2.

Specimen 3D,D'',D''': embryonic day 14.5 (more )
Note: Double labeled: green - Onecut1; magenta - Pou4f2 (assay MGI:5509319).
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted 3D''' , 3D'' , 3D All retinal ganglion cells in the ganglion cell layer expressed both Pou4f2 and Oc1. Overlap of expression in the neuroblast layer decreased.

Specimen not shown E12.5: embryonic day 12.5 (more )
Note: Also stained for Isl1 (assay MGI:5509329).
Structure Level Pattern Image Note
TS20: retina Present Regionally restricted There was overlap of expression with Isl1 in both the ganglion cell layer and the neuroblast layer.

Specimen not shown E14.5: embryonic day 14.5 (more )
Note: Also stained for Isl1 (assay MGI:5509329).
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted There was overlap of expression with Isl1 in both the ganglion cell layer and the neuroblast layer.

Specimen 6B,B',B''': embryonic day 12.5 (more )
Note: Double labeled: green - Onecut1; magenta - Pcna (assay MGI:5509378).
Structure Level Pattern Image Note
TS20: retina Present Regionally restricted 6B''' , 6B' , 6B Most expressing cells in the neuroblast layer were also PCNA-positive, but some cells were PCNA-negative.

Specimen 6E,E',E''': embryonic day 14.5 (more )
Note: Double labeled: green - Onecut1; magenta - Pcna (assay MGI:5509378).
Structure Level Pattern Image Note
TS22: retina Present Regionally restricted 6E , 6E''' , 6E' At E14.5, many more expressing cells became postmitotic.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory