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Gene Expression Data
Assay Details
Assay
Reference: J:94411 Kelly RG, et al., The del22q11.2 candidate gene Tbx1 regulates branchiomeric myogenesis. Hum Mol Genet. 2004 Nov 15;13(22):2829-40
Assay type: RNA in situ
MGI Accession ID: MGI:5446361
Gene symbol: Tcf21
Gene name: transcription factor 21
Probe: Capsulin probe
Probe preparation: Antisense RNA
Results
Specimen 2A: embryonic day 9.5; Tbx1tm1Pa/Tbx1+ (more )
Note: Specimen taken early in day.
Structure Level Pattern Image Note
TS14: 1st branchial arch mesenchyme Present 2A
TS14: 2nd branchial arch mesenchyme Present 2A
TS14: pharyngeal region Present Regionally restricted 2A Expression is present in the caudal pharynx.
TS14: septum transversum Present 2A
Specimen 2B: embryonic day 9.5; Tbx1tm1Pa/Tbx1tm1Pa (more )
Note: Specimen taken early in day.
Structure Level Pattern Image Note
TS14: 1st branchial arch mesenchyme Present 2B Expression is as in wild type.
TS14: 2nd branchial arch Absent 2B
TS14: pharyngeal region Present Regionally restricted 2B Expression is present in the caudal pharynx.
TS14: septum transversum Present 2B
Specimen 2C: embryonic day 9.5; Tbx1tm1Pa/Tbx1+ (more )
Note: Specimen taken late in day.
Structure Level Pattern Image Note
TS15: 1st branchial arch mesenchyme Present 2C
TS15: 2nd branchial arch mesenchyme Present 2C
TS15: pharynx Present Regionally restricted 2C Expression is present in the caudal pharynx.
TS15: septum transversum Present 2C
Specimen 2D: embryonic day 9.5; Tbx1tm1Pa/Tbx1tm1Pa (more )
Note: Specimen taken late in day.
Structure Level Pattern Image Note
TS15: 1st branchial arch mesenchyme Present 2D Expression is as in wild type.
TS15: 2nd branchial arch Absent 2D
TS15: pharynx Present Regionally restricted 2D Expression is present in the caudal pharynx.
TS15: septum transversum Present 2D
Specimen 2E: embryonic day 9.5; Tbx1tm1Pa/Tbx1+ (more )
Note: Specimen taken late in day. transverse section
Structure Level Pattern Image Note
TS15: 1st branchial arch mesenchyme Present 2E
TS15: 2nd branchial arch mesenchyme Present 2E
Specimen 2F: embryonic day 9.5; Tbx1tm1Pa/Tbx1tm1Pa (more )
Note: Specimen taken late in day. transverse section
Structure Level Pattern Image Note
TS15: 1st branchial arch mesenchyme Present 2F
TS15: 2nd branchial arch mesenchyme Absent 2F
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory