Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:131720
Aquino JB, et al., Differential expression and dynamic changes of murine NEDD9 in progenitor cells of diverse tissues. Gene Expr Patterns. 2008 Apr;8(4):217-26
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:5428730
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Gene symbol:
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Nedd9
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Gene name:
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neural precursor cell expressed, developmentally down-regulated gene 9
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Probe:
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Nedd9 cDNA1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
|
Specimen
not shown:
embryonic day 9.0
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: neural tube |
Present |
Regionally restricted |
|
Expression was high in dorsal and ventral domains in the trunk neural tube.
|
Specimen
1C:
embryonic day 9.5
(more )
Specimen
1C:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Regionally restricted |
1C
|
Expression was strong in the ventricular Nestin+ progenitor domain and excluded from the Tubb3+ cells at the emerging marginal zone.
|
Specimen
1F:
embryonic day 10.5
(more )
Specimen
1F:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: neural tube |
Present |
Regionally restricted |
1F
|
Expression was confined to the ventricular zone (Nestin+/Tubb3-) and excluded from the post-mitotic neurons in the marginal zone and neuronal progenitor cells in the intermediate zone.
|
Specimen
1I & 1L:
embryonic day 12.5
(more )
Note: Fig. 1L is a higher magnification of 1I.
Specimen
1I & 1L:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Fig. 1L is a higher magnification of 1I.
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: spinal cord |
Present |
Regionally restricted |
1I
,
1L
|
Expression was detected in radial glia progenitors of the neuroepithelium (Nestin+/Sox2+). It was mutually exclusive with with Tubb3 (Tuj1) expression.
|
Specimen
2A:
embryonic day 9.5
(more )
Specimen
2A:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Regionally restricted |
2A
|
Expression was detected in the neuroepithelium of the ventral regions largely overlapping with the Neurog2 expression domain in the dorsoventral axis. Expression extends ventrally up to the floor plate and was not detected in the emerging marginal zone.
|
Specimen
2D:
embryonic day 10.5
(more )
Specimen
2D:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: neural tube |
Present |
Regionally restricted |
2D
|
Expression was detected in 2 discrete domains. Expression was detected in the ventricular zone. No expression in committed progenitors of the intermediate zone.
|
Specimen
2F:
embryonic day 12.5
(more )
Specimen
2F:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3D:
embryonic day 10.5
(more )
Specimen
3D:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: midbrain |
Present |
Regionally restricted |
3D
|
Expression was detected in the apical ventral midbrain neuroepithelium.
|
Specimen
3E:
embryonic day 10.5
(more )
Specimen
3E:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: midbrain |
Present |
Regionally restricted |
3E
|
Expression was detected in the apical ventral midbrain neuroepithelium.
|
Specimen
3H:
embryonic day 12.5
(more )
Specimen
3H:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: midbrain |
Present |
Regionally restricted |
3H
|
Expression was detected in the ventricular zone of the ventral midbrain.
|
Specimen
4D:
embryonic day 12.5
(more )
Specimen
4D:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: cerebellum primordium |
Strong |
Regionally restricted |
4D
|
Expression was detected in the ventricular zone of the cerebellum.
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Specimen
5A:
embryonic day 10.0
(more )
Specimen
5A:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
5B:
embryonic day 10.0
(more )
Specimen
5B:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
5D:
embryonic day 10.5
(more )
Specimen
5D:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: optic cup inner layer |
Present |
Regionally restricted |
5D
|
Expression was detected in the prospective retina in the area corresponding to the ventricular zone of the neuroepithelium.
|
TS17: nasal pit epithelium |
Present |
|
5D
|
Expression was detected in olfactory pit epithelium.
|
Specimen
5E:
embryonic day 10.5
(more )
Specimen
5E:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
6A:
embryonic day 12.5
(more )
Specimen
6A:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
6E:
embryonic day 12.5
(more )
Specimen
6E:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
6G:
embryonic day 12.5
(more )
Specimen
6G:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: trigeminal ganglion |
Absent |
|
6G
|
|
TS20: cartilage |
Present |
Regionally restricted |
6G
|
Expression was detected in progenitor cells of the prospective cartilage at cranial level.
|
TS20: blood vessel |
Present |
Regionally restricted |
6G
|
Expression was detected in endothelial cells of vessels in the trigeminal ganglia.
|
Specimen
7A:
embryonic day 10.5
(more )
Specimen
7A:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
7B:
embryonic day 12.5
(more )
Specimen
7B:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
7G:
embryonic day 12.5
(more )
Specimen
7G:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: hindbrain |
Present |
Regionally restricted |
7G
|
Expression was detected in meninges of posterior encephalic regions.
|
Specimen
7H:
embryonic day 12.5
(more )
Specimen
7H:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS20: urinary system |
Present |
Regionally restricted |
7H
|
Expression was detected in the urinary tract.
|
Specimen
S1A:
postnatal adult
(more )
Specimen
S1A:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Male
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
S1B:
postnatal adult
(more )
Specimen
S1B:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Female
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS28: endometrium |
Present |
Regionally restricted |
S1B
|
Expression was detected in glands of the endometrium.
|
Specimen
S1C:
postnatal adult
(more )
Specimen
S1C:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
S1D:
postnatal adult
(more )
Specimen
S1D:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
S1E:
postnatal adult
(more )
Specimen
S1E:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
S1F:
embryonic day 12.5
(more )
Specimen
S1F:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
not shown:
postnatal adult
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
not shown:
postnatal adult
(more )
Specimen
not shown:
(close )
Genetic Background:
|
C57BL/6
|
Age:
|
postnatal adult
|
Sex:
|
Male
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
|