About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423844
Gene symbol: Inmt
Gene name: indolethylamine N-methyltransferase
Probe: EH1021 probe 982
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH1021; Specimen C2552: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C2552_1_3D
TS22: central nervous system Strong Regionally restricted Embryo_C2552_1_3D
TS22: telencephalon Strong Regionally restricted Embryo_C2552_1_3D
TS22: cerebral cortex Strong Regionally restricted Embryo_C2552_1_3D
TS22: neocortex Strong Regionally restricted Embryo_C2552_1_3D
TS22: olfactory cortex Moderate Regionally restricted Embryo_C2552_1_3D
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C2552_1_3D
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_C2552_1_3D
TS22: basal ganglia Moderate Regionally restricted Embryo_C2552_1_3D
TS22: corpus striatum Moderate Regionally restricted Embryo_C2552_1_2C Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C2552_1_3D
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_C2552_1_3D
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Strong Regionally restricted Embryo_C2552_1_3D
TS22: pretectum Absent
TS22: superior colliculus Strong Regionally restricted Embryo_C2552_1_3D
TS22: inferior colliculus Strong Regionally restricted Embryo_C2552_1_3D
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C2552_1_3D
TS22: hindbrain Moderate Regionally restricted Embryo_C2552_1_3D
TS22: cerebellum Weak Regionally restricted Embryo_C2552_1_3D
TS22: pons Moderate Regionally restricted Embryo_C2552_1_3D
TS22: medulla oblongata Moderate Regionally restricted Embryo_C2552_1_3D
TS22: spinal cord Moderate Regionally restricted Embryo_C2552_1_4B
TS22: choroid plexus Moderate Regionally restricted Embryo_C2552_1_3D
TS22: meninges Strong Regionally restricted Embryo_C2552_1_1D
TS22: peripheral nervous system Moderate Ubiquitous Embryo_C2552_1_3B
TS22: cranial ganglion Moderate Ubiquitous Embryo_C2552_1_2C
TS22: dorsal root ganglion Moderate Ubiquitous Embryo_C2552_1_3B
TS22: eye Strong Regionally restricted Embryo_C2552_1_1B
TS22: retina Moderate Regionally restricted Embryo_C2552_1_1C
TS22: lens Strong Regionally restricted Embryo_C2552_1_1B
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Moderate Regionally restricted Embryo_C2552_1_2A Expression was detected in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C2552_1_5B
TS22: salivary gland Weak Regionally restricted Embryo_C2552_1_3A
TS22: tongue Absent
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Weak Regionally restricted Embryo_C2552_1_4B
TS22: stomach Moderate Regionally restricted Embryo_C2552_1_2A
TS22: liver Weak Ubiquitous Embryo_C2552_1_1C
TS22: respiratory system Weak Regionally restricted Embryo_C2552_1_3D
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Weak Regionally restricted Embryo_C2552_1_3D
TS22: urinary system Strong Regionally restricted Embryo_C2552_1_4D Expression was strong in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Moderate Regionally restricted Embryo_C2552_1_4D
TS22: genital tubercle Strong Regionally restricted Embryo_C2552_1_4D
TS22: gonad Absent
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Moderate Regionally restricted Embryo_C2552_1_4B
TS22: heart Moderate Regionally restricted Embryo_C2552_1_4B
TS22: heart atrium Moderate Regionally restricted Embryo_C2552_1_4B
TS22: heart ventricle Weak Regionally restricted Embryo_C2552_1_4B
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C2552_1_1D Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C2552_1_3D
TS22: cranium Moderate Regionally restricted Embryo_C2552_1_2A Expression was detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C2552_1_1C
TS22: tail Strong Regionally restricted Embryo_C2552_1_4D
TS22: forelimb Strong Regionally restricted Embryo_C2552_1_1C
TS22: hindlimb Strong Regionally restricted Embryo_C2552_1_1C
TS22: integumental system Strong Regionally restricted Embryo_C2552_1_1C
TS22: skin Strong Regionally restricted Embryo_C2552_1_1C
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory