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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422320
Gene symbol: Atp2b3
Gene name: ATPase, Ca++ transporting, plasma membrane 3
Probe: T38833
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EN2262; Specimen N952: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_N952_1_3B
TS22: central nervous system Strong Regionally restricted Embryo_N952_1_3B
TS22: telencephalon Strong Regionally restricted Embryo_N952_1_3B
TS22: cerebral cortex Strong Regionally restricted Embryo_N952_1_3B
TS22: neocortex Strong Regionally restricted Embryo_N952_1_3B
TS22: olfactory cortex Strong Regionally restricted Embryo_N952_1_3C
TS22: main olfactory bulb Strong Regionally restricted Embryo_N952_1_3C
TS22: piriform cortex Weak Ubiquitous Embryo_N952_1_2B
TS22: hippocampus Moderate Regionally restricted Embryo_N952_1_3C
TS22: basal ganglia Moderate Regionally restricted Embryo_N952_1_2B
TS22: corpus striatum Moderate Ubiquitous Embryo_N952_1_2B Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Ubiquitous Embryo_N952_1_3B
TS22: amygdala Moderate Ubiquitous Embryo_N952_1_2B
TS22: telencephalon septum Moderate Ubiquitous Embryo_N952_1_3C
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Ubiquitous Embryo_N952_1_3B
TS22: thalamus Moderate Ubiquitous Embryo_N952_1_3B
TS22: hypothalamus Moderate Ubiquitous Embryo_N952_1_3B
TS22: midbrain Strong Regionally restricted Embryo_N952_1_4B
TS22: pretectum Moderate Ubiquitous Embryo_N952_1_3B
TS22: superior colliculus Strong Regionally restricted Embryo_N952_1_4B
TS22: inferior colliculus Strong Regionally restricted Embryo_N952_1_4B
TS22: midbrain tegmentum Moderate Ubiquitous Embryo_N952_1_3C
TS22: hindbrain Strong Ubiquitous Embryo_N952_1_3C
TS22: cerebellum Strong Ubiquitous Embryo_N952_1_3C
TS22: pons Moderate Ubiquitous Embryo_N952_1_3C
TS22: medulla oblongata Moderate Ubiquitous Embryo_N952_1_3C
TS22: spinal cord Strong Regionally restricted Embryo_N952_1_4B
TS22: choroid plexus Strong Regionally restricted Embryo_N952_1_3B
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_N952_1_2B
TS22: cranial ganglion Strong Ubiquitous Embryo_N952_1_2B
TS22: dorsal root ganglion Strong Ubiquitous Embryo_N952_1_3A
TS22: eye Strong Regionally restricted Embryo_N952_1_1A
TS22: retina Strong Regionally restricted Embryo_N952_1_1A
TS22: lens Moderate Regionally restricted Embryo_N952_1_6D
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Strong Ubiquitous Embryo_N952_1_4B
TS22: olfactory epithelium Strong Ubiquitous Embryo_N952_1_4B
TS22: ear Strong Regionally restricted Embryo_N952_1_2D
TS22: inner ear Strong Regionally restricted Embryo_N952_1_2D
TS22: cochlea Strong Regionally restricted Embryo_N952_1_2D
TS22: inner ear labyrinth Strong Regionally restricted Embryo_N952_1_2C
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_N952_1_3C Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_N952_1_3B
TS22: salivary gland Absent
TS22: tongue Strong Regionally restricted Embryo_N952_1_3C
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Strong Regionally restricted Embryo_N952_1_2B
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_N952_1_1B
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Weak Regionally restricted Embryo_N952_1_3B
TS22: lung Moderate Ubiquitous Embryo_N952_1_1B
TS22: urinary system Strong Regionally restricted Embryo_N952_1_3D Expression was strong in the genito-urinary system.
TS22: metanephros Weak Ubiquitous Embryo_N952_1_3B
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Strong Regionally restricted Embryo_N952_1_3D
TS22: genital tubercle Strong Regionally restricted Embryo_N952_1_3D
TS22: gonad Absent
TS22: gland Weak Regionally restricted Embryo_N952_1_3B Expression was weak in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Weak Regionally restricted Embryo_N952_1_3B
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Ubiquitous Embryo_N952_1_2B Expression was detected in the immune system.
TS22: spleen primordium Moderate Ubiquitous Embryo_N952_1_2B
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Ubiquitous Embryo_N952_1_1B
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Moderate Regionally restricted Embryo_N952_1_4C
TS22: forelimb Strong Regionally restricted Embryo_N952_1_1C
TS22: hindlimb Strong Regionally restricted Embryo_N952_1_1C
TS22: integumental system Moderate Regionally restricted Embryo_N952_1_5D
TS22: skin Absent
TS22: hair Moderate Regionally restricted Embryo_N952_1_5D
TS22: vibrissa follicle Moderate Regionally restricted Embryo_N952_1_5D Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory