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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421225
Gene symbol: Acsl1
Gene name: acyl-CoA synthetase long-chain family member 1
Probe: MH750 probe 644
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH750; Specimen C1269: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1269_5_4A
TS22: central nervous system Strong Regionally restricted Embryo_C1269_5_4A
TS22: telencephalon Weak Regionally restricted Embryo_C1269_5_3A
TS22: cerebral cortex Weak Regionally restricted Embryo_C1269_5_3A
TS22: neocortex Absent
TS22: olfactory cortex Weak Regionally restricted Embryo_C1269_5_3A
TS22: main olfactory bulb Weak Regionally restricted Embryo_C1269_5_3A
TS22: piriform cortex Weak Regionally restricted Embryo_C1269_5_1C
TS22: hippocampus Absent
TS22: basal ganglia Absent
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Weak Regionally restricted Embryo_C1269_5_3C
TS22: pretectum Absent
TS22: superior colliculus Absent
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Weak Regionally restricted Embryo_C1269_5_3C
TS22: hindbrain Strong Regionally restricted Embryo_C1269_5_4A
TS22: cerebellum Weak Regionally restricted Embryo_C1269_5_3A
TS22: pons Strong Regionally restricted Embryo_C1269_5_2C
TS22: medulla oblongata Strong Regionally restricted Embryo_C1269_5_4A
TS22: spinal cord Moderate Regionally restricted Embryo_C1269_5_3C
TS22: choroid plexus Moderate Ubiquitous Embryo_C1269_5_3A
TS22: meninges Moderate Ubiquitous Embryo_C1269_5_3A
TS22: peripheral nervous system Moderate Ubiquitous Embryo_C1269_5_1C
TS22: cranial ganglion Moderate Ubiquitous Embryo_C1269_5_1C
TS22: dorsal root ganglion Moderate Ubiquitous Embryo_C1269_5_3A
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_C1269_5_3A
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1269_5_3A
TS22: ear Strong Regionally restricted Embryo_C1269_5_2D
TS22: inner ear Strong Regionally restricted Embryo_C1269_5_2D
TS22: cochlea Strong Regionally restricted Embryo_C1269_5_2D
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C1269_5_3A Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1269_5_3C
TS22: salivary gland Moderate Regionally restricted Embryo_C1269_5_5C
TS22: tongue Strong Regionally restricted Embryo_C1269_5_3C
TS22: tooth Moderate Regionally restricted Embryo_C1269_5_3B
TS22: palatal shelf Moderate Regionally restricted Embryo_C1269_5_3C
TS22: esophagus Strong Regionally restricted Embryo_C1269_5_3D
TS22: stomach Strong Regionally restricted Embryo_C1269_5_5D
TS22: liver Strong Regionally restricted Embryo_C1269_5_3A
TS22: respiratory system Strong Regionally restricted Embryo_C1269_5_3A
TS22: pharynx Strong Regionally restricted Embryo_C1269_5_3C
TS22: larynx Strong Regionally restricted Embryo_C1269_5_3D
TS22: trachea Strong Regionally restricted Embryo_C1269_5_3D
TS22: main bronchus Strong Regionally restricted Embryo_C1269_5_3B
TS22: lung Strong Regionally restricted Embryo_C1269_5_3A
TS22: urinary system Strong Regionally restricted Embryo_C1269_5_5B Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_C1269_5_5B
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Moderate Regionally restricted Embryo_C1269_5_6A
TS22: genital tubercle Absent
TS22: gonad Moderate Regionally restricted Embryo_C1269_5_6A
TS22: gland Moderate Regionally restricted Embryo_C1269_5_3B Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Moderate Regionally restricted Embryo_C1269_5_3B
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Weak Regionally restricted Embryo_C1269_5_4A
TS22: heart Weak Regionally restricted Embryo_C1269_5_4A
TS22: heart atrium Absent
TS22: heart ventricle Weak Ubiquitous Embryo_C1269_5_4A
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C1269_5_1C Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_C1269_5_4A Expression was weak in the face/soft tissues.
TS22: facial bone primordium Moderate Regionally restricted Embryo_C1269_5_5B
TS22: cranium Moderate Regionally restricted Embryo_C1269_5_4B Expression was detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_C1269_5_5B
TS22: tail Absent
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Strong Regionally restricted Embryo_C1269_5_4C
TS22: skin Strong Regionally restricted Embryo_C1269_5_4C
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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