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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421096
Gene symbol: Birc5
Gene name: baculoviral IAP repeat-containing 5
Probe: MH543 probe 403
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH543; Specimen C1297: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1297_6_2C
TS22: central nervous system Strong Regionally restricted Embryo_C1297_6_2C
TS22: telencephalon Strong Regionally restricted Embryo_C1297_6_2C
TS22: cerebral cortex Strong Regionally restricted Embryo_C1297_6_2C
TS22: neocortex Strong Regionally restricted Embryo_C1297_6_2C
TS22: olfactory cortex Strong Regionally restricted Embryo_C1297_6_4B
TS22: main olfactory bulb Strong Regionally restricted Embryo_C1297_6_4B
TS22: piriform cortex Moderate Scattered Embryo_C1297_6_1A
TS22: hippocampus Strong Regionally restricted Embryo_C1297_6_2A
TS22: basal ganglia Strong Regionally restricted Embryo_C1297_6_1C
TS22: corpus striatum Strong Regionally restricted Embryo_C1297_6_1C Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Weak Scattered Embryo_C1297_6_1A
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1297_6_3C
TS22: pallidum Moderate Regionally restricted Embryo_C1297_6_4B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C1297_6_4A
TS22: thalamus Moderate Regionally restricted Embryo_C1297_6_3C
TS22: hypothalamus Strong Regionally restricted Embryo_C1297_6_4A
TS22: midbrain Strong Regionally restricted Embryo_C1297_6_3A
TS22: pretectum Weak Scattered Embryo_C1297_6_4A
TS22: superior colliculus Strong Regionally restricted Embryo_C1297_6_3A
TS22: inferior colliculus Strong Regionally restricted Embryo_C1297_6_3A
TS22: midbrain tegmentum Weak Regionally restricted Embryo_C1297_6_4A
TS22: hindbrain Strong Regionally restricted Embryo_C1297_6_4C
TS22: cerebellum Strong Regionally restricted Embryo_C1297_6_4C
TS22: pons Moderate Regionally restricted Embryo_C1297_6_4B
TS22: medulla oblongata Moderate Regionally restricted Embryo_C1297_6_3C
TS22: spinal cord Strong Regionally restricted Embryo_C1297_6_3D
TS22: choroid plexus Moderate Regionally restricted Embryo_C1297_6_4A
TS22: meninges Weak Regionally restricted Embryo_C1297_6_4C
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1297_6_1C
TS22: cranial ganglion Weak Regionally restricted Embryo_C1297_6_1C
TS22: dorsal root ganglion Absent
TS22: eye Moderate Regionally restricted Embryo_C1297_6_6D
TS22: retina Moderate Regionally restricted Embryo_C1297_6_6D
TS22: lens Weak Regionally restricted Embryo_C1297_6_6D
TS22: optic nerve Weak Regionally restricted Embryo_C1297_6_5D
TS22: nose Moderate Regionally restricted Embryo_C1297_6_3A
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1297_6_3A
TS22: ear Moderate Regionally restricted Embryo_C1297_6_4C
TS22: inner ear Moderate Regionally restricted Embryo_C1297_6_4C
TS22: cochlea Moderate Regionally restricted Embryo_C1297_6_4C
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1297_6_2B
TS22: middle ear Weak Regionally restricted Embryo_C1297_6_1A
TS22: alimentary system Strong Regionally restricted Embryo_C1297_6_2C Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1297_6_4B
TS22: salivary gland Strong Regionally restricted Embryo_C1297_6_2C
TS22: tongue Moderate Regionally restricted Embryo_C1297_6_4A
TS22: tooth Strong Regionally restricted Embryo_C1297_6_3A
TS22: palatal shelf Moderate Regionally restricted Embryo_C1297_6_3B
TS22: esophagus Moderate Regionally restricted Embryo_C1297_6_4A
TS22: stomach Weak Regionally restricted Embryo_C1297_6_6A
TS22: liver Strong Regionally restricted Embryo_C1297_6_5A
TS22: respiratory system Moderate Regionally restricted Embryo_C1297_6_5C
TS22: pharynx Weak Regionally restricted Embryo_C1297_6_3C
TS22: larynx Weak Regionally restricted Embryo_C1297_6_3C
TS22: trachea Weak Regionally restricted Embryo_C1297_6_3D
TS22: main bronchus Weak Regionally restricted Embryo_C1297_6_3C
TS22: lung Moderate Regionally restricted Embryo_C1297_6_5C
TS22: urinary system Moderate Regionally restricted Embryo_C1297_6_5A Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1297_6_5A
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_C1297_6_4A
TS22: urethra Weak Regionally restricted Embryo_C1297_6_4A
TS22: reproductive system Weak Regionally restricted Embryo_C1297_6_3C
TS22: genital tubercle Weak Regionally restricted Embryo_C1297_6_3C
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C1297_6_5A Expression was strong in the endocrine system.
TS22: thyroid gland Strong Regionally restricted Embryo_C1297_6_3B
TS22: pituitary gland Strong Regionally restricted Embryo_C1297_6_4A
TS22: pancreas Strong Regionally restricted Embryo_C1297_6_5A
TS22: adrenal gland Weak Regionally restricted Embryo_C1297_6_5A
TS22: cardiovascular system Weak Regionally restricted Embryo_C1297_6_4A
TS22: heart Weak Regionally restricted Embryo_C1297_6_4A
TS22: heart atrium Weak Regionally restricted Embryo_C1297_6_4A
TS22: heart ventricle Weak Regionally restricted Embryo_C1297_6_4A
TS22: blood vessel Weak Regionally restricted Embryo_C1297_6_4B
TS22: hemolymphoid system Strong Regionally restricted Embryo_C1297_6_3B Expression was strong in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C1297_6_6C
TS22: thymus primordium Strong Regionally restricted Embryo_C1297_6_3B
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1297_6_1A
TS22: face Moderate Regionally restricted Embryo_C1297_6_4A Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Moderate Regionally restricted Embryo_C1297_6_3D
TS22: tail Moderate Regionally restricted Embryo_C1297_6_3C
TS22: forelimb Strong Regionally restricted Embryo_C1297_6_1B
TS22: hindlimb Moderate Regionally restricted Embryo_C1297_6_1C
TS22: integumental system Strong Regionally restricted Embryo_C1297_6_1C
TS22: skin Moderate Regionally restricted Embryo_C1297_6_3C
TS22: hair Strong Regionally restricted Embryo_C1297_6_1C
TS22: vibrissa follicle Strong Regionally restricted Embryo_C1297_6_1C Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory