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Gene Expression Data
Assay Details
Assay
Reference: J:173784 Ling KH, et al., Deep sequencing analysis of the developing mouse brain reveals a novel microRNA. BMC Genomics. 2011;12:176
Assay type: RNA in situ
MGI Accession ID: MGI:5302227
Gene symbol: Mir3099
Gene name: microRNA 3099
Probe: miR-3099 probe1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Present Widespread 3C
TS15: heart Absent 3C
TS15: branchial arch Present 3C
TS15: forelimb bud Present 3C
TS15: hindlimb ridge Present 3C
TS15: somite Present 3C
TS15: telencephalon Present 3C

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: telencephalon Present Regionally restricted 3D Expression was detected in the neuroepithelium.

Specimen 4 miR-3099 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo Strong Widespread 4_miR-3099 E11.5
TS19: midbrain Present Regionally restricted 4_E11.5 1 , 4_miR-3099 E11.5 Expression was detected in the germinal layer of mesencephalon.
TS19: telencephalon Present Regionally restricted 4_miR-3099 E11.5 , 4_E11.5 2 Expression was detected in the preplate of the telencephalon.
TS19: hindlimb bud Present 4_miR-3099 E11.5
TS19: somite Present 4_miR-3099 E11.5

Specimen 4 miR-3099 E13.5: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: cortical plate Present 4_E13.5 1 , 4_E13.5 2 , 4_miR-3099 E13.5
TS21: corpus striatum Present 4_E13.5 1 , 4_miR-3099 E13.5
TS21: telencephalon Present Regionally restricted 4_miR-3099 E13.5 , 4_E13.5 1 Expression was detected in the medial pallium (hippocampal allocortex).
TS21: midbrain Present Regionally restricted 4_miR-3099 E13.5 , 4_E13.5 3 Expression was detected in the subventricular/ventricular zone of the superior and inferior colliculi.

Specimen 4 miR-3099 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cortical plate Present 4_E15.5 1 , 4_E15.5 2 , 4_miR-3099 E15.5

Specimen 4 miR-3099 E17.5: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cortical plate Present 4_E17.5 1 , 4_miR-3099 E17.5 , 4_E17.5 3
TS25: piriform cortex Present 4_E17.5 2 , 4_miR-3099 E17.5
TS25: hippocampus Weak 4_E17.5 1 , 4_miR-3099 E17.5


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/24/2026
MGI 6.24
The Jackson Laboratory