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Gene Expression Data
Assay Details
Assay
Reference: J:106092 Tissir F, et al., Expression of planar cell polarity genes during development of the mouse CNS. Eur J Neurosci. 2006 Feb;23(3):597-607
Assay type: RNA in situ
MGI Accession ID: MGI:4946666
Gene symbol: Vangl1
Gene name: VANGL planar cell polarity 1
Probe: Vangl1 cDNA1
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen 1F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo Trace 1F

Specimen 2P: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: liver Strong 2P
TS20: cranial ganglion Moderate 2P
TS20: dorsal root ganglion Moderate 2P
TS20: central nervous system Weak 2P
TS20: brain Present Regionally restricted 2P A small focus of expression was associated with the raphe of the brainstem.

Specimen not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: embryo Weak Widespread Expression was detected in almost all non-neural tissue, with highest intensity in the skin and liver.
TS22: liver Present Expression in the skin and liver was lower at E14.5 than at E12.5.
TS22: skin Present Expression in the skin and liver was lower at E14.5 than at E12.5.
TS22: brain Present Regionally restricted No signal was seen in the brain, except in the raphe in the brainstem.
TS22: brainstem Present Regionally restricted No signal was seen in the brain, except in the raphe in the brainstem.

Specimen Table 2: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: brainstem Present Regionally restricted Expression was present in the reticular formation and the cochleovestibular nuclei.
TS25: cerebellum Present Regionally restricted Expression was present in the external granule layer.
TS25: diencephalon ventricular layer Ambiguous Expression was very low or undetectable.
TS25: hypothalamus Ambiguous Expression was very low or undetectable.
TS25: midbrain tegmentum Ambiguous Expression was very low or undetectable.
TS25: midbrain ventricular layer Ambiguous Expression was very low or undetectable.
TS25: tectum Ambiguous Expression was very low or undetectable.
TS25: thalamus Present Regionally restricted Expression was detected in the dorsal thalamus but was very low or undetectable in the ventral thalamus.
TS25: retina Ambiguous Regionally restricted Expression was very low or undetectable in the retina ventricular zone and ganglion cells.
TS25: cortical plate Ambiguous Regionally restricted Expression was very low or undetectable in the ventricular zone/subventricular zone and the cortical plate proper.
TS25: corpus striatum Ambiguous Regionally restricted Expression was very low or undetectable in the striatum ventricular zone/subventricular zone and the striatum.
TS25: main olfactory bulb Ambiguous Regionally restricted Expression was very low or undetectable in the olfactory bulb and mitral cells.

Specimen 4F1: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hair bulb Present 4F1
TS25: pituitary gland Present 4F1
TS25: skin Present 4F1
TS25: spinal cord ventricular layer Strong 4F1
TS25: hindbrain ventricular layer Strong Regionally restricted 4F1 Expression was strong in the ventricular lining of the fourth ventricle and aqueduct.
TS25: midbrain ventricular layer Strong Regionally restricted 4F1 Expression was strong in the ventricular lining of the fourth ventricle and aqueduct.
TS25: epithalamus Present Regionally restricted 4F1 Expression was detected in the habenular nuclei.

Specimen 5I: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: brain Trace 5I
TS27: habenula Present Regionally restricted 5I Expression was detected in habenular nuclei.

Specimen not shown: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: midbrain Present Regionally restricted Expression was detected in some nuclei in the basal mesencephalon.

Specimen Table 3: postnatal day 10 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Ambiguous Expression was very low or undetectable.
TS28: diencephalon Ambiguous Regionally restricted Expression was very low or undetectable in the diencephalon ventricular zone.
TS28: dentate gyrus Ambiguous Expression was very low or undetectable.
TS28: dorsal thalamus Ambiguous Expression was very low or undetectable.
TS28: hippocampus pyramidal cell layer Ambiguous Expression was very low or undetectable.
TS28: hypothalamus Ambiguous Expression was very low or undetectable.
TS28: main olfactory bulb granule cell layer Ambiguous Expression was very low or undetectable.
TS28: main olfactory bulb mitral cell layer Ambiguous Expression was very low or undetectable.
TS28: prethalamus Ambiguous Expression was very low or undetectable.
TS28: cerebral cortex Ambiguous Regionally restricted Expression was very low or undetectable in the cortical plate proper and ventricular zone/subventricular zone.
TS28: corpus striatum Ambiguous Regionally restricted Expression was very low or undetectable in the striatum and the ventricular zone/subventricular zone.
TS28: rostral migratory stream Ambiguous Regionally restricted Expression was very low or undetectable in the rostral migratory stream.

Specimen not shown: postnatal day 21 (more )
Structure Level Pattern Image Note
TS28: brain Absent


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory