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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945924
Gene symbol: Hacl1
Gene name: 2-hydroxyacyl-CoA lyase 1
Probe: g02211
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g02211 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g02211_sj_g119_083_e11 , g02211_sj_g119_033_e11
TS19: midbrain Present Widespread g02211_sj_g119_083_e11 , g02211_sj_g119_033_e11
TS19: hindbrain Present Widespread g02211_sj_g119_083_e11 , g02211_sj_g119_033_e11
TS19: future spinal cord Present Widespread g02211_sj_g119_033_e11 , g02211_sj_g119_083_e11
TS19: telencephalon Present Widespread g02211_sj_g119_033_e11 , g02211_sj_g119_083_e11
Specimen g02211 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g02211_sj_g122_048_e15 , g02211_sj_g122_098_e15 , g02211_sj_g122_148_e15
TS23: ganglionic eminence Present Widespread g02211_sj_g122_048_e15 , g02211_sj_g122_098_e15 , g02211_sj_g122_148_e15
TS23: hindbrain Present Widespread g02211_sj_g122_148_e15 , g02211_sj_g122_098_e15 , g02211_sj_g122_048_e15
TS23: hippocampus Present Widespread g02211_sj_g122_098_e15 , g02211_sj_g122_048_e15 , g02211_sj_g122_148_e15
TS23: hypothalamus Present Widespread g02211_sj_g122_048_e15 , g02211_sj_g122_148_e15 , g02211_sj_g122_098_e15
TS23: midbrain Present Widespread g02211_sj_g122_148_e15 , g02211_sj_g122_048_e15 , g02211_sj_g122_098_e15
TS23: retina Present Regionally restricted g02211_sj_g122_098_e15 , g02211_sj_g122_148_e15 , g02211_sj_g122_048_e15
TS23: spinal cord Present Regionally restricted g02211_sj_g122_098_e15 , g02211_sj_g122_148_e15 , g02211_sj_g122_048_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g02211_sj_g122_098_e15 , g02211_sj_g122_148_e15 , g02211_sj_g122_048_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Strong Regionally restricted g02211_sj_g122_048_e15 , g02211_sj_g122_148_e15 , g02211_sj_g122_098_e15 Expression was region specific and scattered.
Specimen g02211 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Regionally restricted g02211_sj_g131_119_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_069_p7 Expression was region specific and scattered.
TS28: basal ganglia Present Widespread g02211_sj_g131_119_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_069_p7
TS28: brainstem Present Widespread g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_119_p7
TS28: choroid plexus Present Regionally restricted g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_119_p7
TS28: hippocampus Present Widespread g02211_sj_g131_069_p7 , g02211_sj_g131_119_p7 , g02211_sj_g131_019_p7
TS28: hypothalamus Present Widespread g02211_sj_g131_119_p7 , g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7
TS28: meninges Present Regionally restricted g02211_sj_g131_119_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_069_p7
TS28: midbrain Present Widespread g02211_sj_g131_019_p7 , g02211_sj_g131_119_p7 , g02211_sj_g131_069_p7
TS28: main olfactory bulb Present Widespread g02211_sj_g131_019_p7 , g02211_sj_g131_069_p7 , g02211_sj_g131_119_p7
TS28: retina Present Regionally restricted g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_119_p7
TS28: spinal cord Present Widespread g02211_sj_g131_119_p7 , g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7
TS28: thalamus Present Widespread g02211_sj_g131_069_p7 , g02211_sj_g131_119_p7 , g02211_sj_g131_019_p7
TS28: cerebellum Strong Regionally restricted g02211_sj_g131_069_p7 , g02211_sj_g131_019_p7 , g02211_sj_g131_119_p7 Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g02211_sj_g131_019_p7 , g02211_sj_g131_069_p7 , g02211_sj_g131_119_p7 Expression was region specific and scattered.
Specimen g02211 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g02211_sj_g132_019_adc , g02211_sj_g127_072_ads , g02211_sj_g127_022_ads , g02211_sj_g132_069_adc , g02211_sj_g127_122_ads
TS28: basal ganglia Present Widespread g02211_sj_g127_072_ads , g02211_sj_g132_019_adc , g02211_sj_g132_069_adc , g02211_sj_g127_022_ads , g02211_sj_g127_122_ads
TS28: brainstem Present Widespread g02211_sj_g132_019_adc , g02211_sj_g132_069_adc , g02211_sj_g127_122_ads , g02211_sj_g127_022_ads , g02211_sj_g127_072_ads
TS28: cerebral cortex Present Widespread g02211_sj_g127_022_ads , g02211_sj_g132_019_adc , g02211_sj_g127_122_ads , g02211_sj_g127_072_ads , g02211_sj_g132_069_adc
TS28: hippocampus Present Regionally restricted g02211_sj_g127_072_ads , g02211_sj_g127_122_ads , g02211_sj_g132_069_adc , g02211_sj_g132_019_adc , g02211_sj_g127_022_ads Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g02211_sj_g127_022_ads , g02211_sj_g132_069_adc , g02211_sj_g127_122_ads , g02211_sj_g127_072_ads , g02211_sj_g132_019_adc
TS28: meninges Present Regionally restricted g02211_sj_g127_022_ads , g02211_sj_g132_019_adc , g02211_sj_g132_069_adc , g02211_sj_g127_072_ads , g02211_sj_g127_122_ads
TS28: midbrain Present Widespread g02211_sj_g127_072_ads , g02211_sj_g127_022_ads , g02211_sj_g127_122_ads , g02211_sj_g132_069_adc , g02211_sj_g132_019_adc
TS28: main olfactory bulb Present Widespread g02211_sj_g132_069_adc , g02211_sj_g127_122_ads , g02211_sj_g132_019_adc , g02211_sj_g127_022_ads , g02211_sj_g127_072_ads
TS28: retina Present Regionally restricted g02211_sj_g132_019_adc , g02211_sj_g127_022_ads , g02211_sj_g132_069_adc , g02211_sj_g127_072_ads , g02211_sj_g127_122_ads
TS28: spinal cord Present Widespread g02211_sj_g132_019_adc , g02211_sj_g127_022_ads , g02211_sj_g132_069_adc , g02211_sj_g127_122_ads , g02211_sj_g127_072_ads
TS28: thalamus Present Widespread g02211_sj_g127_072_ads , g02211_sj_g127_022_ads , g02211_sj_g132_069_adc , g02211_sj_g132_019_adc , g02211_sj_g127_122_ads
TS28: cerebellum Strong Regionally restricted g02211_sj_g127_022_ads , g02211_sj_g127_072_ads , g02211_sj_g127_122_ads , g02211_sj_g132_019_adc , g02211_sj_g132_069_adc Expression was region specific and scattered.
TS28: choroid plexus Strong Regionally restricted g02211_sj_g132_069_adc , g02211_sj_g127_122_ads , g02211_sj_g127_072_ads , g02211_sj_g132_019_adc , g02211_sj_g127_022_ads
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
MGI 6.23 		The Jackson Laboratory