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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945783
Gene symbol: Atg4d
Gene name: autophagy related 4D, cysteine peptidase
Probe: g01518
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01518 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Scattered g01518_sj_g94_046_e11 , g01518_sj_g94_096_e11
TS19: midbrain Present Scattered g01518_sj_g94_046_e11 , g01518_sj_g94_096_e11
TS19: hindbrain Present Scattered g01518_sj_g94_096_e11 , g01518_sj_g94_046_e11
TS19: future spinal cord Present Scattered g01518_sj_g94_096_e11 , g01518_sj_g94_046_e11
TS19: telencephalon Present Scattered g01518_sj_g94_096_e11 , g01518_sj_g94_046_e11
Specimen g01518 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15 , g01518_sj_g96_028_e15
TS23: ganglionic eminence Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_028_e15 , g01518_sj_g96_128_e15
TS23: hindbrain Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15 , g01518_sj_g96_028_e15
TS23: hippocampus Present Widespread g01518_sj_g96_128_e15 , g01518_sj_g96_078_e15 , g01518_sj_g96_028_e15
TS23: hypothalamus Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_028_e15 , g01518_sj_g96_128_e15
TS23: midbrain Present Widespread g01518_sj_g96_028_e15 , g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15
TS23: neocortex Present Widespread g01518_sj_g96_028_e15 , g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15
TS23: main olfactory bulb Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15 , g01518_sj_g96_028_e15
TS23: retina Present Widespread g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15 , g01518_sj_g96_028_e15
TS23: spinal cord Present Regionally restricted g01518_sj_g96_028_e15 , g01518_sj_g96_078_e15 , g01518_sj_g96_128_e15 Expression was region specific and scattered.
Specimen g01518 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01518_sj_g104_087_p7 , g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7
TS28: basal ganglia Present Widespread g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_037_p7
TS28: brainstem Present Widespread g01518_sj_g104_037_p7 , g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7
TS28: cerebellum Present Widespread g01518_sj_g104_037_p7 , g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7
TS28: cerebral cortex Present Widespread g01518_sj_g104_137_p7 , g01518_sj_g104_037_p7 , g01518_sj_g104_087_p7
TS28: choroid plexus Present Regionally restricted g01518_sj_g104_037_p7 , g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7
TS28: hippocampus Present Regionally restricted g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_087_p7 Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_087_p7 Expression was region specific and scattered.
TS28: midbrain Present Widespread g01518_sj_g104_037_p7 , g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7
TS28: main olfactory bulb Present Regionally restricted g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_087_p7 Expression was region specific and scattered.
TS28: retina Present Regionally restricted g01518_sj_g104_087_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_037_p7
TS28: spinal cord Present Widespread g01518_sj_g104_087_p7 , g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7
TS28: thalamus Present Widespread g01518_sj_g104_037_p7 , g01518_sj_g104_137_p7 , g01518_sj_g104_087_p7
Specimen g01518 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01518_sj_g99_108_ads , g01518_sj_g110_086_adc , g01518_sj_g99_058_ads , g01518_sj_g110_036_adc , g01518_sj_g99_008_ads
TS28: basal ganglia Present Widespread g01518_sj_g99_008_ads , g01518_sj_g110_036_adc , g01518_sj_g110_086_adc , g01518_sj_g99_108_ads , g01518_sj_g99_058_ads
TS28: brainstem Present Widespread g01518_sj_g99_108_ads , g01518_sj_g110_036_adc , g01518_sj_g99_058_ads , g01518_sj_g110_086_adc , g01518_sj_g99_008_ads
TS28: cerebral cortex Present Widespread g01518_sj_g99_108_ads , g01518_sj_g110_086_adc , g01518_sj_g110_036_adc , g01518_sj_g99_008_ads , g01518_sj_g99_058_ads
TS28: choroid plexus Present Widespread g01518_sj_g110_086_adc , g01518_sj_g110_036_adc , g01518_sj_g99_008_ads , g01518_sj_g99_108_ads , g01518_sj_g99_058_ads
TS28: hippocampus Present Widespread g01518_sj_g110_036_adc , g01518_sj_g110_086_adc , g01518_sj_g99_108_ads , g01518_sj_g99_008_ads , g01518_sj_g99_058_ads
TS28: hypothalamus Present Widespread g01518_sj_g99_008_ads , g01518_sj_g110_086_adc , g01518_sj_g110_036_adc , g01518_sj_g99_108_ads , g01518_sj_g99_058_ads
TS28: midbrain Present Widespread g01518_sj_g99_058_ads , g01518_sj_g99_108_ads , g01518_sj_g110_086_adc , g01518_sj_g99_008_ads , g01518_sj_g110_036_adc
TS28: main olfactory bulb Present Widespread g01518_sj_g110_036_adc , g01518_sj_g99_108_ads , g01518_sj_g110_086_adc , g01518_sj_g99_008_ads , g01518_sj_g99_058_ads
TS28: retina Present Widespread g01518_sj_g110_086_adc , g01518_sj_g110_036_adc , g01518_sj_g99_008_ads , g01518_sj_g99_108_ads , g01518_sj_g99_058_ads
TS28: spinal cord Present Widespread g01518_sj_g99_058_ads , g01518_sj_g110_036_adc , g01518_sj_g99_108_ads , g01518_sj_g99_008_ads , g01518_sj_g110_086_adc
TS28: thalamus Present Widespread g01518_sj_g110_036_adc , g01518_sj_g99_108_ads , g01518_sj_g99_058_ads , g01518_sj_g99_008_ads , g01518_sj_g110_086_adc
TS28: cerebellum Strong Regionally restricted g01518_sj_g110_036_adc , g01518_sj_g99_058_ads , g01518_sj_g110_086_adc , g01518_sj_g99_008_ads , g01518_sj_g99_108_ads Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
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