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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945731
Gene symbol: Scrt2
Gene name: scratch family zinc finger 2
Probe: g01365
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01365 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Strong Regionally restricted g01365_sj_g50_008_e11 , g01365_sj_g50_058_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g01365_sj_g50_008_e11 , g01365_sj_g50_058_e11 Expression was region specific and scattered.
TS19: hindbrain Strong Regionally restricted g01365_sj_g50_058_e11 , g01365_sj_g50_008_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g01365_sj_g50_058_e11 , g01365_sj_g50_008_e11 Expression was region specific and scattered.
TS19: telencephalon Strong Regionally restricted g01365_sj_g50_008_e11 , g01365_sj_g50_058_e11 Expression was region specific and scattered.
Specimen g01365 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01365_sj_g50_058_e15 , g01365_sj_g50_008_e15 , g01365_sj_g50_108_e15
TS23: hypothalamus Present Widespread g01365_sj_g50_108_e15 , g01365_sj_g50_058_e15 , g01365_sj_g50_008_e15
TS23: main olfactory bulb Present Regionally restricted g01365_sj_g50_058_e15 , g01365_sj_g50_108_e15 , g01365_sj_g50_008_e15 Expression was region specific and scattered.
TS23: retina Present Regionally restricted g01365_sj_g50_008_e15 , g01365_sj_g50_058_e15 , g01365_sj_g50_108_e15
TS23: spinal cord Present Regionally restricted g01365_sj_g50_108_e15 , g01365_sj_g50_008_e15 , g01365_sj_g50_058_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Regionally restricted g01365_sj_g50_108_e15 , g01365_sj_g50_058_e15 , g01365_sj_g50_008_e15 Expression was region specific and scattered.
TS23: hindbrain Strong Regionally restricted g01365_sj_g50_108_e15 , g01365_sj_g50_058_e15 , g01365_sj_g50_008_e15 Expression was region specific and scattered.
TS23: hippocampus Strong Regionally restricted g01365_sj_g50_058_e15 , g01365_sj_g50_108_e15 , g01365_sj_g50_008_e15 Expression was region specific and scattered.
TS23: midbrain Strong Regionally restricted g01365_sj_g50_108_e15 , g01365_sj_g50_008_e15 , g01365_sj_g50_058_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g01365_sj_g50_058_e15 , g01365_sj_g50_108_e15 , g01365_sj_g50_008_e15 Expression was region specific and scattered.
Specimen g01365 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01365_sj_g50_058_p7 , g01365_sj_g50_008_p7 , g01365_sj_g50_108_p7
TS28: basal ganglia Present Widespread g01365_sj_g50_108_p7 , g01365_sj_g50_008_p7 , g01365_sj_g50_058_p7
TS28: cerebellum Present Widespread g01365_sj_g50_108_p7 , g01365_sj_g50_058_p7 , g01365_sj_g50_008_p7
TS28: cerebral cortex Present Widespread g01365_sj_g50_008_p7 , g01365_sj_g50_108_p7 , g01365_sj_g50_058_p7
TS28: choroid plexus Present Regionally restricted g01365_sj_g50_008_p7 , g01365_sj_g50_058_p7 , g01365_sj_g50_108_p7
TS28: hypothalamus Present Widespread g01365_sj_g50_008_p7 , g01365_sj_g50_108_p7 , g01365_sj_g50_058_p7
TS28: meninges Present Regionally restricted g01365_sj_g50_058_p7 , g01365_sj_g50_108_p7 , g01365_sj_g50_008_p7
TS28: midbrain Present Widespread g01365_sj_g50_058_p7 , g01365_sj_g50_108_p7 , g01365_sj_g50_008_p7
TS28: main olfactory bulb Present Regionally restricted g01365_sj_g50_058_p7 , g01365_sj_g50_008_p7 , g01365_sj_g50_108_p7 Expression was region specific and scattered.
TS28: spinal cord Present Widespread g01365_sj_g50_108_p7 , g01365_sj_g50_008_p7 , g01365_sj_g50_058_p7
TS28: brainstem Strong Regionally restricted g01365_sj_g50_008_p7 , g01365_sj_g50_058_p7 , g01365_sj_g50_108_p7 Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g01365_sj_g50_058_p7 , g01365_sj_g50_008_p7 , g01365_sj_g50_108_p7 Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g01365_sj_g50_008_p7 , g01365_sj_g50_058_p7 , g01365_sj_g50_108_p7
TS28: thalamus Strong Regionally restricted g01365_sj_g50_108_p7 , g01365_sj_g50_058_p7 , g01365_sj_g50_008_p7 Expression was region specific and scattered.
Specimen g01365 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01365_sj_g58_121_ads , g01365_sj_g58_021_ads , g01365_sj_g50_058_adc , g01365_sj_g58_071_ads , g01365_sj_g50_008_adc
TS28: cerebellum Present Regionally restricted g01365_sj_g50_008_adc , g01365_sj_g50_058_adc , g01365_sj_g58_021_ads , g01365_sj_g58_121_ads , g01365_sj_g58_071_ads Expression was region specific and scattered.
TS28: choroid plexus Present Regionally restricted g01365_sj_g58_071_ads , g01365_sj_g50_008_adc , g01365_sj_g58_021_ads , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads
TS28: hippocampus Present Regionally restricted g01365_sj_g58_071_ads , g01365_sj_g58_021_ads , g01365_sj_g50_058_adc , g01365_sj_g50_008_adc , g01365_sj_g58_121_ads Expression was region specific and scattered.
TS28: hypothalamus Present Widespread g01365_sj_g50_008_adc , g01365_sj_g58_121_ads , g01365_sj_g58_021_ads , g01365_sj_g58_071_ads , g01365_sj_g50_058_adc
TS28: midbrain Present Widespread g01365_sj_g58_121_ads , g01365_sj_g50_008_adc , g01365_sj_g58_021_ads , g01365_sj_g50_058_adc , g01365_sj_g58_071_ads
TS28: main olfactory bulb Present Regionally restricted g01365_sj_g58_021_ads , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads , g01365_sj_g58_071_ads , g01365_sj_g50_008_adc Expression was region specific and scattered.
TS28: retina Present Regionally restricted g01365_sj_g58_121_ads , g01365_sj_g50_008_adc , g01365_sj_g50_058_adc , g01365_sj_g58_071_ads , g01365_sj_g58_021_ads
TS28: spinal cord Present Widespread g01365_sj_g58_071_ads , g01365_sj_g58_021_ads , g01365_sj_g50_008_adc , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads
TS28: thalamus Present Regionally restricted g01365_sj_g58_071_ads , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads , g01365_sj_g50_008_adc , g01365_sj_g58_021_ads Expression was region specific and scattered.
TS28: basal ganglia Strong Regionally restricted g01365_sj_g58_021_ads , g01365_sj_g50_008_adc , g01365_sj_g58_071_ads , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads Expression was region specific and scattered.
TS28: brainstem Strong Regionally restricted g01365_sj_g50_058_adc , g01365_sj_g58_021_ads , g01365_sj_g58_121_ads , g01365_sj_g58_071_ads , g01365_sj_g50_008_adc Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g01365_sj_g50_008_adc , g01365_sj_g58_071_ads , g01365_sj_g50_058_adc , g01365_sj_g58_121_ads , g01365_sj_g58_021_ads Expression was region specific and scattered.
Specimen S2B: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: nervous system Present S2B LOC545474 middle , S2B LOC545474 left , S2B LOC545474 right
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/23/2024
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