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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945717
Gene symbol: Ctsd
Gene name: cathepsin D
Probe: g01313
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01313 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Strong Regionally restricted g01313_sj_g43_038_e11 , g01313_sj_g43_088_e11 Expression was region specific and scattered.
TS19: midbrain Strong Regionally restricted g01313_sj_g43_038_e11 , g01313_sj_g43_088_e11 Expression was region specific and scattered.
TS19: hindbrain Strong Regionally restricted g01313_sj_g43_038_e11 , g01313_sj_g43_088_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g01313_sj_g43_088_e11 , g01313_sj_g43_038_e11 Expression was region specific and scattered.
TS19: telencephalon Strong Regionally restricted g01313_sj_g43_088_e11 , g01313_sj_g43_038_e11 Expression was region specific and scattered.

Specimen g01313 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.
TS23: hindbrain Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.
TS23: hippocampus Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.
TS23: hypothalamus Strong Regionally restricted g01313_sj_g43_038_e15 , g01313_sj_g43_138_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.
TS23: midbrain Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_088_e15 , g01313_sj_g43_038_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 , g01313_sj_g43_138_e15 Expression was region specific and scattered.
TS23: main olfactory bulb Strong Regionally restricted g01313_sj_g43_088_e15 , g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 Expression was region specific and scattered.
TS23: retina Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_088_e15 , g01313_sj_g43_038_e15
TS23: spinal cord Strong Regionally restricted g01313_sj_g43_138_e15 , g01313_sj_g43_038_e15 , g01313_sj_g43_088_e15 Expression was region specific and scattered.

Specimen g01313 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01313_sj_g43_038_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7
TS28: basal ganglia Present Widespread g01313_sj_g43_038_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_088_p7
TS28: cerebral cortex Present Widespread g01313_sj_g43_038_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7
TS28: hypothalamus Present Widespread g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_038_p7
TS28: meninges Present Regionally restricted g01313_sj_g43_038_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_088_p7
TS28: midbrain Present Widespread g01313_sj_g43_138_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_038_p7
TS28: main olfactory bulb Present Widespread g01313_sj_g43_038_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_088_p7
TS28: spinal cord Present Widespread g01313_sj_g43_038_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7
TS28: thalamus Present Widespread g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_038_p7
TS28: brainstem Strong Regionally restricted g01313_sj_g43_138_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_038_p7 Expression was region specific and scattered.
TS28: cerebellum Strong Regionally restricted g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_038_p7 Expression was region specific and scattered.
TS28: choroid plexus Strong Regionally restricted g01313_sj_g43_138_p7 , g01313_sj_g43_038_p7 , g01313_sj_g43_088_p7
TS28: hippocampus Strong Regionally restricted g01313_sj_g43_038_p7 , g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7 Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g01313_sj_g43_088_p7 , g01313_sj_g43_138_p7 , g01313_sj_g43_038_p7

Specimen g01313 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01313_sj_g41_088_adc , g01313_sj_g41_038_adc , g01313_sj_g39_038_ads , g01313_sj_g39_088_ads , g01313_sj_g39_138_ads
TS28: basal ganglia Present Widespread g01313_sj_g39_038_ads , g01313_sj_g39_088_ads , g01313_sj_g41_038_adc , g01313_sj_g41_088_adc , g01313_sj_g39_138_ads
TS28: cerebellum Present Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g39_138_ads , g01313_sj_g39_038_ads , g01313_sj_g41_038_adc , g01313_sj_g39_088_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g01313_sj_g39_038_ads , g01313_sj_g39_088_ads , g01313_sj_g41_088_adc , g01313_sj_g39_138_ads , g01313_sj_g41_038_adc
TS28: hippocampus Present Regionally restricted g01313_sj_g39_088_ads , g01313_sj_g41_088_adc , g01313_sj_g39_038_ads , g01313_sj_g39_138_ads , g01313_sj_g41_038_adc Expression was region specific and scattered.
TS28: hypothalamus Present Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g39_088_ads , g01313_sj_g39_138_ads , g01313_sj_g41_038_adc , g01313_sj_g39_038_ads Expression was region specific and scattered.
TS28: meninges Present Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g39_088_ads , g01313_sj_g39_038_ads , g01313_sj_g39_138_ads , g01313_sj_g41_038_adc
TS28: midbrain Present Widespread g01313_sj_g39_138_ads , g01313_sj_g39_038_ads , g01313_sj_g41_038_adc , g01313_sj_g39_088_ads , g01313_sj_g41_088_adc
TS28: retina Present Regionally restricted g01313_sj_g41_038_adc , g01313_sj_g39_038_ads , g01313_sj_g41_088_adc , g01313_sj_g39_088_ads , g01313_sj_g39_138_ads
TS28: thalamus Present Widespread g01313_sj_g41_038_adc , g01313_sj_g39_138_ads , g01313_sj_g39_038_ads , g01313_sj_g41_088_adc , g01313_sj_g39_088_ads
TS28: brainstem Strong Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g39_138_ads , g01313_sj_g41_038_adc , g01313_sj_g39_088_ads , g01313_sj_g39_038_ads Expression was region specific and scattered.
TS28: choroid plexus Strong Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g41_038_adc , g01313_sj_g39_138_ads , g01313_sj_g39_038_ads , g01313_sj_g39_088_ads
TS28: main olfactory bulb Strong Regionally restricted g01313_sj_g39_038_ads , g01313_sj_g41_038_adc , g01313_sj_g41_088_adc , g01313_sj_g39_088_ads , g01313_sj_g39_138_ads Expression was region specific and scattered.
TS28: spinal cord Strong Regionally restricted g01313_sj_g41_088_adc , g01313_sj_g41_038_adc , g01313_sj_g39_038_ads , g01313_sj_g39_138_ads , g01313_sj_g39_088_ads Expression was region specific and scattered.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory